Ss1.1-Pig1-77K11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGACCCCCCATCAGCAGCCGCACTCCCAGATCCTTCACCATCACCTGCAGCAGGATGGCC AGACGGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCCAGACCAACA AGTCTGCCTACAACAGCTACAGCTGGGGGGCCAACTGAGGCCCTGACCCTCTTCTCCCGG TCCCATCTTCTGAGAGGGCTTCTCAGCCTGGCAACTATGGAAACAGCATCAAAGAGAGAA AGGAATGTGGGGGGGTTCCGCTGCCCCCCACACCCAGCGGCCCACCCCATGCCTCAGCTT CATGTCTGTCCCATTCCCATACCATCCCCACTCTGTTGTATGTATTATAGGATTTGTATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGACCCCCCATCAGCAGCCGCACTCCCAGATCCTTCACCATCACCTGCAGCAGGATGGCC AGACGGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCCAGACCAACA AGTCTGCCTACAACAGCTACAGCTGGGGGGCCAACTGAGGCCCTGACCCTCTTCTCCCGG TCCCATCTTCTGAGAGGGCTTCTCAGCCTGGCAACTATGGAAACAGCATCAAAGAGAGAA AGGAATGTGGGGGGGTTCCGCTGCCCCCCACACCCAGCGGCCCACCCCATGCCTCAGCTT CATGTCTGTCCCATTCCCATACCATCCCCACTCTGTTGTATGTATTATAGGATTTGTATT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 99-218, - strand, RNAz p=0.940264 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 99-218, - strand, RNAz p=0.940264 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 60-360, gnl|bosTau2|chr3 (8362691-8362991) | |
| 60-360, gnl|Hg17|chr1 (151055746-151056044) | |
| 60-360, gnl|Mm7|chr3 (90131652-90131354) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 60-360, gnl|bosTau2|chr3 (8362691-8362991) | |
| 60-360, gnl|Hg17|chr1 (151055746-151056044) | |
| 60-360, gnl|Mm7|chr3 (90131652-90131354) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fhi (0.169578) | |
| lnt (0.142308) | |
| nmm (0.132802) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fhi (0.169578) | |
| lnt (0.142308) | |
| nmm (0.132802) | |
| ecc (0.115035) |