Ss1.1-Pig1-79C15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCAGTTCAGACCCCAAATGCTTCAGATCATCAGACAGCTTCCCCGCCTTCAGGATGTCC AATGCATGAAGGGAACACGAAAGGCTGTCCAGTGAGCACAGAGCCATCGGACTCAGCCTG TGGGAGCACAACAAACTCGGTGCCTGCACACCAGGATCGCGCCTACGAGTACGTGCAGTG TCCCGTCATCGGCACGCTGGCTGAGAACAGGGACAAGCTGGATCCCTCCAACCTGATGCC ACCACCTAATCAGACGCCAGCCCCTGATCAGCCGTTTGCACTATCTACTGTGCGAGAGGA GTCGTCTATCCCGAGGGCAGATTCAGATAAAAAGTGGGTTTATCCTTCCGAGCAGATGTT CTGGAATGCCATGTTAAGGAAAGGGTGGAAGTGGAAGGAGGAGGATATTAGTCAGAAAGA CATGTACAACATCATCCGAATTCACAACCAGAATAACGAGCAGGCTTGGAAAGAGATCTT GAAGTGGGAAGCCCTTCACGCCGCGGAGTGTCCTTGCGGCCCGTCACTGCTCCGGTTTGG AGGGAAGGCGAAAGAGTATTCACCAAGGGCAAGAATTCGTTCCTGGATGGGGTACGAGTT GCCTTTCGACAGGCACGATTGGATCGTCAACCGCTGTGGGACGGAAGTCAGATACGTCAT CGACTACTACGACGGCGGCGCGGTCAACCAGGACTACCAGTTCACCATCCTGGACGTCCG GCCCGCTTTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCAGTTCAGACCCCAAATGCTTCAGATCATCAGACAGCTTCCCCGCCTTCAGGATGTCC AATGCATGAAGGGAACACGAAAGGCTGTCCAGTGAGCACAGAGCCATCGGACTCAGCCTG TGGGAGCACAACAAACTCGGTGCCTGCACACCAGGATCGCGCCTACGAGTACGTGCAGTG TCCCGTCATCGGCACGCTGGCTGAGAACAGGGACAAGCTGGATCCCTCCAACCTGATGCC ACCACCTAATCAGACGCCAGCCCCTGATCAGCCGTTTGCACTATCTACTGTGCGAGAGGA GTCGTCTATCCCGAGGGCAGATTCAGATAAAAAGTGGGTTTATCCTTCCGAGCAGATGTT CTGGAATGCCATGTTAAGGAAAGGGTGGAAGTGGAAGGAGGAGGATATTAGTCAGAAAGA CATGTACAACATCATCCGAATTCACAACCAGAATAACGAGCAGGCTTGGAAAGAGATCTT GAAGTGGGAAGCCCTTCACGCCGCGGAGTGTCCTTGCGGCCCGTCACTGCTCCGGTTTGG AGGGAAGGCGAAAGAGTATTCACCAAGGGCAAGAATTCGTTCCTGGATGGGGTACGAGTT GCCTTTCGACAGGCACGATTGGATCGTCAACCGCTGTGGGACGGAAGTCAGATACGTCAT CGACTACTACGACGGCGGCGCGGTCAACCAGGACTACCAGTTCACCATCCTGGACGTCCG GCCCGCTTTGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 235-386, gnl|bosTau2|chrX (41350255-41350104) | |
| 235-386, gnl|canFam2|chrX (7646961-7647134) | |
| 235-386, gnl|danRer3|chrUn (94183223-94183044) | |
| 235-386, gnl|dasNov1|scaffold_96106 (6815-7000) | |
| 235-386, gnl|echTel1|scaffold_21856 (2540-2694) | |
| 235-386, gnl|fr1|chrUn (318540253-318540094) | |
| 235-386, gnl|galGal2|chr8 (13685900-13685721) | |
| 235-386, gnl|hg17|chrX (10895018-10895199) | |
| 235-386, gnl|Hg17|chrX (10895043-10895194) | |
| 235-386, gnl|loxAfr1|scaffold_934 (38440-38253) | |
| 235-386, gnl|mm7|chrX (164091084-164090903) | |
| 235-386, gnl|Mm7|chrX (164091057-164090906) | |
| 235-386, gnl|monDom2|scaffold_25 (30954810-30954624) | |
| 235-386, gnl|oryCun1|scaffold_112773 (49-230) | |
| 235-386, gnl|panTro1|chrX (11215077-11215258) | |
| 235-386, gnl|rheMac2|chrX (8776778-8776959) | |
| 235-386, gnl|rn3|chrX (45674410-45674585) | |
| 235-386, gnl|tetNig1|chrUn_random (137431662-137431814) | |
| 235-386, gnl|xenTro1|scaffold_36 (155061-154884) | |
| 591-732, gnl|bosTau2|chrX (41345860-41345719) | |
| 591-732, gnl|canFam2|chrX (7651095-7651313) | |
| 591-732, gnl|danRer3|chrUn (94178390-94178176) | |
| 591-732, gnl|dasNov1|scaffold_161694 (1596-1801) | |
| 591-732, gnl|echTel1|scaffold_321930 (1301-1518) | |
| 591-732, gnl|fr1|chrUn (318538706-318538491) | |
| 591-732, gnl|galGal2|chr8 (13683079-13682868) | |
| 591-732, gnl|hg17|chrX (10899377-10899591) | |
| 591-732, gnl|Hg17|chrX (10899388-10899529) | |
| 591-732, gnl|loxAfr1|scaffold_52282 (3803-4023) | |
| 591-732, gnl|mm7|chrX (164087398-164087180) | |
| 591-732, gnl|Mm7|chrX (164087385-164087244) | |
| 591-732, gnl|monDom2|scaffold_25 (30944801-30944583) | |
| 591-732, gnl|panTro1|chrX (11219435-11219649) | |
| 591-732, gnl|rheMac2|chrX (8781139-8781353) | |
| 591-732, gnl|rn3|chrX (45678725-45678943) | |
| 591-732, gnl|tetNig1|chrUn_random (137432437-137432640) | |
| 591-732, gnl|xenTro1|scaffold_36 (152747-152539) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 235-386, gnl|bosTau2|chrX (41350255-41350104) | |
| 235-386, gnl|canFam2|chrX (7646961-7647134) | |
| 235-386, gnl|danRer3|chrUn (94183223-94183044) | |
| 235-386, gnl|dasNov1|scaffold_96106 (6815-7000) | |
| 235-386, gnl|echTel1|scaffold_21856 (2540-2694) | |
| 235-386, gnl|fr1|chrUn (318540253-318540094) | |
| 235-386, gnl|galGal2|chr8 (13685900-13685721) | |
| 235-386, gnl|hg17|chrX (10895018-10895199) | |
| 235-386, gnl|Hg17|chrX (10895043-10895194) | |
| 235-386, gnl|loxAfr1|scaffold_934 (38440-38253) | |
| 235-386, gnl|mm7|chrX (164091084-164090903) | |
| 235-386, gnl|Mm7|chrX (164091057-164090906) | |
| 235-386, gnl|monDom2|scaffold_25 (30954810-30954624) | |
| 235-386, gnl|oryCun1|scaffold_112773 (49-230) | |
| 235-386, gnl|panTro1|chrX (11215077-11215258) | |
| 235-386, gnl|rheMac2|chrX (8776778-8776959) | |
| 235-386, gnl|rn3|chrX (45674410-45674585) | |
| 235-386, gnl|tetNig1|chrUn_random (137431662-137431814) | |
| 235-386, gnl|xenTro1|scaffold_36 (155061-154884) | |
| 591-732, gnl|bosTau2|chrX (41345860-41345719) | |
| 591-732, gnl|canFam2|chrX (7651095-7651313) | |
| 591-732, gnl|danRer3|chrUn (94178390-94178176) | |
| 591-732, gnl|dasNov1|scaffold_161694 (1596-1801) | |
| 591-732, gnl|echTel1|scaffold_321930 (1301-1518) | |
| 591-732, gnl|fr1|chrUn (318538706-318538491) | |
| 591-732, gnl|galGal2|chr8 (13683079-13682868) | |
| 591-732, gnl|hg17|chrX (10899377-10899591) | |
| 591-732, gnl|Hg17|chrX (10899388-10899529) | |
| 591-732, gnl|loxAfr1|scaffold_52282 (3803-4023) | |
| 591-732, gnl|mm7|chrX (164087398-164087180) | |
| 591-732, gnl|Mm7|chrX (164087385-164087244) | |
| 591-732, gnl|monDom2|scaffold_25 (30944801-30944583) | |
| 591-732, gnl|panTro1|chrX (11219435-11219649) | |
| 591-732, gnl|rheMac2|chrX (8781139-8781353) | |
| 591-732, gnl|rn3|chrX (45678725-45678943) | |
| 591-732, gnl|tetNig1|chrUn_random (137432437-137432640) | |
| 591-732, gnl|xenTro1|scaffold_36 (152747-152539) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |