Ss1.1-Pig1-80G19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGACTACATGGACGCCAGGCGGGACTTCACTTTCAACAAGGACAGCTTCGGGGACTTC CCGGCCATGGGGCGGGAGCTCCACCAAGGCGGCCGGCGCTACGTGATGATCGTGGATCCT GCCATCAGCAGCTCCGGCCCCCCAGGGACCTACCGCCCCTATGACGAGGGTCTGCGGAGG GGGGTCTTCGTCACCAATGAGACGGGGCAGCCGCTGATTGGGAAGGTGTGGCCTGGACTC ACCGCTTTCCCTGACTTCACCAATCCCGAGGCCCTTGACTGGTGGCAGGACATGGTGGCT GAGTTCCACGCCCAGGTGCCCTTCGATGGCATGTGGATTGACATGAACGAGCCGTCGAAT TTCGTGAGGGGCTCAGTGGACGGCTGCCCTGACAGCGACCTGGAGAACCCTCCTTACGTG CCAGGGGTTGTGGGCGGGATGCTCCAGGCAGCCACCATCTGCGCGTCAAGCCGCCAGTTC CTCTCCACGCACTACGACCTGCACAACCTGTATGGCCTGACTGAAGCCTTGGCCTCCCAC AGGGCACTGGTGAAGGTTCGGGGGACGCGTCCCTTTGTGATCTCTCGCTCGACCTTCGCG GGCCACGGCCGATACGCCGGCCACTGGACAGGGGATGTGTGGAGCAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGACTACATGGACGCCAGGCGGGACTTCACTTTCAACAAGGACAGCTTCGGGGACTTC CCGGCCATGGGGCGGGAGCTCCACCAAGGCGGCCGGCGCTACGTGATGATCGTGGATCCT GCCATCAGCAGCTCCGGCCCCCCAGGGACCTACCGCCCCTATGACGAGGGTCTGCGGAGG GGGGTCTTCGTCACCAATGAGACGGGGCAGCCGCTGATTGGGAAGGTGTGGCCTGGACTC ACCGCTTTCCCTGACTTCACCAATCCCGAGGCCCTTGACTGGTGGCAGGACATGGTGGCT GAGTTCCACGCCCAGGTGCCCTTCGATGGCATGTGGATTGACATGAACGAGCCGTCGAAT TTCGTGAGGGGCTCAGTGGACGGCTGCCCTGACAGCGACCTGGAGAACCCTCCTTACGTG CCAGGGGTTGTGGGCGGGATGCTCCAGGCAGCCACCATCTGCGCGTCAAGCCGCCAGTTC CTCTCCACGCACTACGACCTGCACAACCTGTATGGCCTGACTGAAGCCTTGGCCTCCCAC AGGGCACTGGTGAAGGTTCGGGGGACGCGTCCCTTTGTGATCTCTCGCTCGACCTTCGCG GGCCACGGCCGATACGCCGGCCACTGGACAGGGGATGTGTGGAGCAAC |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 224-338, gnl|bosTau2|chr19 (47216363-47216477) | |
| 224-338, gnl|canFam2|chr9 (4596494-4596365) | |
| 224-338, gnl|danRer3|chr14 (36383985-36383858) | |
| 224-338, gnl|dasNov1|scaffold_31740 (16015-15882) | |
| 224-338, gnl|echTel1|scaffold_324366 (5467-5600) | |
| 224-338, gnl|fr1|chrUn (288505156-288505033) | |
| 224-338, gnl|galGal2|chr14 (4768253-4768110) | |
| 224-338, gnl|hg17|chr17 (75699107-75699241) | |
| 224-338, gnl|Hg17|chr17 (75699119-75699233) | |
| 224-338, gnl|loxAfr1|scaffold_99205 (5549-5682) | |
| 224-338, gnl|mm7|chr11 (119386535-119386666) | |
| 224-338, gnl|Mm7|chr11 (119386544-119386658) | |
| 224-338, gnl|monDom2|scaffold_18 (10873656-10873791) | |
| 224-338, gnl|oryCun1|scaffold_181464 (28517-28651) | |
| 224-338, gnl|panTro1|chr19 (79390819-79390953) | |
| 224-338, gnl|rheMac2|chr16 (75554614-75554748) | |
| 224-338, gnl|rn3|chrUn (52113221-52113352) | |
| 224-338, gnl|tetNig1|chr3 (9182318-9182196) | |
| 421-562, gnl|bosTau2|chr19 (47217103-47217244) | |
| 421-562, gnl|canFam2|chr9 (4595790-4595658) | |
| 421-562, gnl|danRer3|chr14 (36382251-36382116) | |
| 421-562, gnl|dasNov1|scaffold_31740 (15331-15188) | |
| 421-562, gnl|fr1|chrUn (288504723-288504592) | |
| 421-562, gnl|galGal2|chr14 (4767772-4767644) | |
| 421-562, gnl|hg17|chr17 (75700369-75700511) | |
| 421-562, gnl|Hg17|chr17 (75700373-75700555) | |
| 421-562, gnl|mm7|chr11 (119387302-119387434) | |
| 421-562, gnl|Mm7|chr11 (119387306-119387515) | |
| 421-562, gnl|monDom2|scaffold_18 (10875286-10875426) | |
| 421-562, gnl|panTro1|chr19 (79392643-79392785) | |
| 421-562, gnl|rheMac2|chr16 (75555886-75556028) | |
| 421-562, gnl|tetNig1|chr3 (9181844-9181722) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 224-338, gnl|bosTau2|chr19 (47216363-47216477) | |
| 224-338, gnl|canFam2|chr9 (4596494-4596365) | |
| 224-338, gnl|danRer3|chr14 (36383985-36383858) | |
| 224-338, gnl|dasNov1|scaffold_31740 (16015-15882) | |
| 224-338, gnl|echTel1|scaffold_324366 (5467-5600) | |
| 224-338, gnl|fr1|chrUn (288505156-288505033) | |
| 224-338, gnl|galGal2|chr14 (4768253-4768110) | |
| 224-338, gnl|hg17|chr17 (75699107-75699241) | |
| 224-338, gnl|Hg17|chr17 (75699119-75699233) | |
| 224-338, gnl|loxAfr1|scaffold_99205 (5549-5682) | |
| 224-338, gnl|mm7|chr11 (119386535-119386666) | |
| 224-338, gnl|Mm7|chr11 (119386544-119386658) | |
| 224-338, gnl|monDom2|scaffold_18 (10873656-10873791) | |
| 224-338, gnl|oryCun1|scaffold_181464 (28517-28651) | |
| 224-338, gnl|panTro1|chr19 (79390819-79390953) | |
| 224-338, gnl|rheMac2|chr16 (75554614-75554748) | |
| 224-338, gnl|rn3|chrUn (52113221-52113352) | |
| 224-338, gnl|tetNig1|chr3 (9182318-9182196) | |
| 421-562, gnl|bosTau2|chr19 (47217103-47217244) | |
| 421-562, gnl|canFam2|chr9 (4595790-4595658) | |
| 421-562, gnl|danRer3|chr14 (36382251-36382116) | |
| 421-562, gnl|dasNov1|scaffold_31740 (15331-15188) | |
| 421-562, gnl|fr1|chrUn (288504723-288504592) | |
| 421-562, gnl|galGal2|chr14 (4767772-4767644) | |
| 421-562, gnl|hg17|chr17 (75700369-75700511) | |
| 421-562, gnl|Hg17|chr17 (75700373-75700555) | |
| 421-562, gnl|mm7|chr11 (119387302-119387434) | |
| 421-562, gnl|Mm7|chr11 (119387306-119387515) | |
| 421-562, gnl|monDom2|scaffold_18 (10875286-10875426) | |
| 421-562, gnl|panTro1|chr19 (79392643-79392785) | |
| 421-562, gnl|rheMac2|chr16 (75555886-75556028) | |
| 421-562, gnl|tetNig1|chr3 (9181844-9181722) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) | |
| clu (0.119646) |