Non-Coding RNA Search

Ss1.1-Pig1-80H17.5

Sequence:


               
               ATCGCCGAGTACAAACGACTCAACTTCCACCTCTACATGGCACTCAAGAAGGCACTGTTC
AAACCTGGAGCCTGGTTCAAAGGGATCCTGCTCCCGCTGTGCGAGTCGGGCACCTGCACC
CTCCGGGAAGCCATCATCCTGGGCAGCATCATCACTAAGTGCTCCATCCCGGTGCTGCAC
TCCAGGTAGTGTCGCGGGGTCTGGGGGACCACTGGTGGGTGGGTGTCAGATCCCGGCAGA
GTCCCGGCACTTGGGGAATGGAGCAGGGAGGGCACTAAGTGTAGCGCTGGGTTCGCGGCT
CATTTAAGCCAGCGGGTGTGTCATTACGCCGCAAGATTGTCAGTTCCGCGGGAACAAGAC
CCCAGGGCCTGGCGTATGGTAGGCTCANTAAATAGTTGAATGAATGAGTGGGGAACATGG
GAAGAGAGTGTGTTAGGAATGGGGCTCTCCAGACGTTTGGACGTATTTTAATCGGATACG
GAGACAAACACACTGAGCCAGAGGTCGGGGTTTGGCATGAATCAGTGAAGCGCTGGTGTC
TGGAGTTGAGGGAGTTGAAACTGGGCAGGTGAGAGTGCGGGAGAGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCGCCGAGTACAAACGACTCAACTTCCACCTCTACATGGCACTCAAGAAGGCACTGTTC
AAACCTGGAGCCTGGTTCAAAGGGATCCTGCTCCCGCTGTGCGAGTCGGGCACCTGCACC
CTCCGGGAAGCCATCATCCTGGGCAGCATCATCACTAAGTGCTCCATCCCGGTGCTGCAC
TCCAGGTAGTGTCGCGGGGTCTGGGGGACCACTGGTGGGTGGGTGTCAGATCCCGGCAGA
GTCCCGGCACTTGGGGAATGGAGCAGGGAGGGCACTAAGTGTAGCGCTGGGTTCGCGGCT
CATTTAAGCCAGCGGGTGTGTCATTACGCCGCAAGATTGTCAGTTCCGCGGGAACAAGAC
CCCAGGGCCTGGCGTATGGTAGGCTCANTAAATAGTTGAATGAATGAGTGGGGAACATGG
GAAGAGAGTGTGTTAGGAATGGGGCTCTCCAGACGTTTGGACGTATTTTAATCGGATACG
GAGACAAACACACTGAGCCAGAGGTCGGGGTTTGGCATGAATCAGTGAAGCGCTGGTGTC
TGGAGTTGAGGGAGTTGAAACTGGGCAGGTGAGAGTGCGGGAGAGTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               81-556, gnl|bosTau2|chr23 (15416367-15416833)
               

               
               81-556, gnl|Hg17|chr6 (42007442-42007930)
               

               
               81-556, gnl|Mm7|chr17 (45739036-45738559)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               81-556, gnl|bosTau2|chr23 (15416367-15416833)
               

               
               81-556, gnl|Hg17|chr6 (42007442-42007930)
               

               
               81-556, gnl|Mm7|chr17 (45739036-45738559)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	81-556, gnl\|bosTau2\|chr23 (15416367-15416833)
	81-556, gnl\|Hg17\|chr6 (42007442-42007930)
	81-556, gnl\|Mm7\|chr17 (45739036-45738559)