Ss1.1-Pig1-81B15.5
|
GGACCTCCAGGATTATCACCGACACCGGTACCAGCAAGGTGTTCCCGAAGGGGTCCACGA
CCTGCCCCCAGGAGTGGCCCTACCTCTGGAGTCCAACCTGGCCTTCATGAATGGCATCAG
CTTCACCAAGGGTTGCTACATTGGCCAGGAACTGACGGCCCGCACCCACCATACAGGTGT
CATCCGAAAACGCCTCTTCCCAGTACAGCTCTCAGGCCGCCTCCCTGTGGGCAGCATTGC
TCCTGGCACCTCTGTGCTCACTGAGTCCGGGCAGGCAGCTGGCAAGTATAGGGCAGGCCT
GGGGGATGTGGGGCTGGCTCTGTTGCGGACTGAGAAAATCAAGGGTCCTCTCCACATCAG
AACCTCTGAGAGTGGCCTGGTAGCTCTAACTGCATCTGTGCCAGACTGGTGGCCCACAGC
CACCAAGTAGCCCTAGGTGTTCCTGCACTCCTGCACAGGGCCTCTGTCCATGTGCACTCT
GTAAGCTGGCCTCCACTTCCCAGGGTGACCCAGTTGAACAGACACATTTTGGAGGGTCCC
AAGTGTATATGGGCTTCCCAGGGCTGTAGGCATGGAGGGGCAAGCTACTGCAACCCAGGT
GTCTTCAGCCCATCGTGCTTCCTATGGAGGGTTCAAAGCATGGGAGTCCCTCCACCCTGG
AGGCTCTGTGGCTGAAGCATCTGGAGCCCCAGCTTCCATCAGACCCTGGATGAGATTCCA
GACCATATAGGTCTGGAGGTTGTTCATCCATCAGCCAAAGAGTGGATGACTAGGATGCCT
CTGGCCTGCTCACACCCCTCTGAGCCTGCTTAGGTGGGCCTGGGAAAGAGGCATCTCAGT
GTCCGAGGGGCTCAAGAGGTGAGTGGGCTCTGGGAATTGTCTTACTGTGTTGGCTTGAGG
GCATGTCTCAGGGTGGGAATCTTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGACCTCCAGGATTATCACCGACACCGGTACCAGCAAGGTGTTCCCGAAGGGGTCCACGA
CCTGCCCCCAGGAGTGGCCCTACCTCTGGAGTCCAACCTGGCCTTCATGAATGGCATCAG
CTTCACCAAGGGTTGCTACATTGGCCAGGAACTGACGGCCCGCACCCACCATACAGGTGT
CATCCGAAAACGCCTCTTCCCAGTACAGCTCTCAGGCCGCCTCCCTGTGGGCAGCATTGC
TCCTGGCACCTCTGTGCTCACTGAGTCCGGGCAGGCAGCTGGCAAGTATAGGGCAGGCCT
GGGGGATGTGGGGCTGGCTCTGTTGCGGACTGAGAAAATCAAGGGTCCTCTCCACATCAG
AACCTCTGAGAGTGGCCTGGTAGCTCTAACTGCATCTGTGCCAGACTGGTGGCCCACAGC
CACCAAGTAGCCCTAGGTGTTCCTGCACTCCTGCACAGGGCCTCTGTCCATGTGCACTCT
GTAAGCTGGCCTCCACTTCCCAGGGTGACCCAGTTGAACAGACACATTTTGGAGGGTCCC
AAGTGTATATGGGCTTCCCAGGGCTGTAGGCATGGAGGGGCAAGCTACTGCAACCCAGGT
GTCTTCAGCCCATCGTGCTTCCTATGGAGGGTTCAAAGCATGGGAGTCCCTCCACCCTGG
AGGCTCTGTGGCTGAAGCATCTGGAGCCCCAGCTTCCATCAGACCCTGGATGAGATTCCA
GACCATATAGGTCTGGAGGTTGTTCATCCATCAGCCAAAGAGTGGATGACTAGGATGCCT
CTGGCCTGCTCACACCCCTCTGAGCCTGCTTAGGTGGGCCTGGGAAAGAGGCATCTCAGT
GTCCGAGGGGCTCAAGAGGTGAGTGGGCTCTGGGAATTGTCTTACTGTGTTGGCTTGAGG
GCATGTCTCAGGGTGGGAATCTTG
|
|
gi|34877572|ref|XP_344644.1| |
Protein identifier
|
gi|34877572|ref|XP_344644.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3' of NM_001010867, + |
|
3' of NM_001010867, + |
Human gene identifier and UTR site,
human gene reading direction
|
3' of NM_001010867, + |
|
3' of NM_001010867, + |
|
37-689, gnl|bosTau2|chr7 (1719300-1719945) |
|
37-689, gnl|Hg17|chr1 (224669556-224670179) |
| |
|
690-924, gnl|bosTau2|chr7 (1720008-1720242) |
|
690-924, gnl|canFam2|chr14 (3750802-3750565) |
|
690-924, gnl|hg17|chr1 (224670157-224670446) |
|
690-924, gnl|Hg17|chr1 (224670200-224670442) |
|
690-924, gnl|mm7|chr11 (59239586-59239324) |
|
690-924, gnl|panTro1|chr1 (208460559-208460848) |
|
690-924, gnl|rheMac2|chr1 (142206887-142206598) |
|
690-924, gnl|rn3|chr17_random (32069-31810) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
37-689, gnl|bosTau2|chr7 (1719300-1719945) |
|
37-689, gnl|Hg17|chr1 (224669556-224670179) |
| |
|
690-924, gnl|bosTau2|chr7 (1720008-1720242) |
|
690-924, gnl|canFam2|chr14 (3750802-3750565) |
|
690-924, gnl|hg17|chr1 (224670157-224670446) |
|
690-924, gnl|Hg17|chr1 (224670200-224670442) |
|
690-924, gnl|mm7|chr11 (59239586-59239324) |
|
690-924, gnl|panTro1|chr1 (208460559-208460848) |
|
690-924, gnl|rheMac2|chr1 (142206887-142206598) |
|
690-924, gnl|rn3|chr17_random (32069-31810) |
