Non-Coding RNA Search

Ss1.1-Pig1-82H21.5

Sequence:


               
               TTTCTTTCTTTCCCTCAGATTAAAATTAGATCTTAGAAAGGGGGAAGCAGAATTTTGGTA
TGGTTCTCTCTAGGAGAAGTTAAAAAAAACTGGAAATCTTATTTAAGGTGAGCTATTTAT
TGAGTTACCTTGAAAAGCATAGCAGGAAGTTCTGAAATTTCTTTTGCACTTTTCTGAGGT
TATCTAAATTTCTTTAACATAATACATAGGCAAGAATATAAGTACGTGGAAATCATGAAG
TAATTGAGGAATTTGAATGAGTAACCTAGAAAATTGACTTGTCAAATAAGAGTGTACTCT
TGAAATGTCACCATCTCCTCCTACTCGCTATCAGTATCCAATTTACAACGTGGTGGGATG
AAAATACCAGTGGGCTAGGTGGCAGAGGAACAGATTTTGGTCTCAGTTTTAAAATTCATT
ATTTGTATATGACCTTTAACTCTTCGATCTTCTGTTGCCTTATCTTCTGTACCAAGGTTG
TTAGGAAAATCAAGATTATGCATATGAAAGCATCTGGATATCGTTAAGCACCATAAATAT
GTAACATATTATAATTACAAGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTTTCTTTCCCTCAGATTAAAATTAGATCTTAGAAAGGGGGAAGCAGAATTTTGGTA
TGGTTCTCTCTAGGAGAAGTTAAAAAAAACTGGAAATCTTATTTAAGGTGAGCTATTTAT
TGAGTTACCTTGAAAAGCATAGCAGGAAGTTCTGAAATTTCTTTTGCACTTTTCTGAGGT
TATCTAAATTTCTTTAACATAATACATAGGCAAGAATATAAGTACGTGGAAATCATGAAG
TAATTGAGGAATTTGAATGAGTAACCTAGAAAATTGACTTGTCAAATAAGAGTGTACTCT
TGAAATGTCACCATCTCCTCCTACTCGCTATCAGTATCCAATTTACAACGTGGTGGGATG
AAAATACCAGTGGGCTAGGTGGCAGAGGAACAGATTTTGGTCTCAGTTTTAAAATTCATT
ATTTGTATATGACCTTTAACTCTTCGATCTTCTGTTGCCTTATCTTCTGTACCAAGGTTG
TTAGGAAAATCAAGATTATGCATATGAAAGCATCTGGATATCGTTAAGCACCATAAATAT
GTAACATATTATAATTACAAGTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-563, gnl|bosTau2|chr2 (68681956-68681401)
               

               
               5-563, gnl|Hg17|chr2 (225068284-225067123)
               

               
               5-563, gnl|Mm7|chr1 (80410714-80410124)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-563, gnl|bosTau2|chr2 (68681956-68681401)
               

               
               5-563, gnl|Hg17|chr2 (225068284-225067123)
               

               
               5-563, gnl|Mm7|chr1 (80410714-80410124)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fat (0.147427)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)

	5-563, gnl\|bosTau2\|chr2 (68681956-68681401)
	5-563, gnl\|Hg17\|chr2 (225068284-225067123)
	5-563, gnl\|Mm7\|chr1 (80410714-80410124)