Non-Coding RNA Search

Ss1.1-Pig1-82M06.5

Sequence:


               
               AGGAAATAGAATGAAAATTTCATAATTTCTTTACTAATTGAGCCATTTAATTTTTAAATG
TTTATATTAGTAAGATAACCATATTTACAATGGGAACTTTTGATCTTGATAGTATTTATA
GTATAAACCAGCCTTGTTAATGAGTGTGTAAATTAAAATATTTACACATAAAAAAGTTCA
TATAATTAAATCGAGATGAATATAGTTTAGAACTATATCTTTAACACATTTTGGTTTCTG
CTCATTTTTACTAGCGTATCGTTGAAGCTGTGATCAGGAGATTACCCATATCTAAATACA
GTTAACAGATCAAGTTAACGGTTATATGACATTTTTAATTCATTCTAATGTTAGAAGCAT
ATAACTAAAGACTTTAGTTGTGAATTAAGAGTGTTACAACTTTTTACCAAGAGCAAAAAA
CCCTCAGTTTATTGTTTTACCTTAGGATCCAATCAGTAAAGTTATATATTTGCAAATATT
GCTATGACAACAAAACCTAATGTCTTTTTAAATGTTAATGATAAGCCTAACTTTTTTTCA
CTTATATATCTGATAAATATAATTTTTTTCAGCTTTAAAGCTTACAGCTTTCAAAAGAAA
ACAGTTCTTTAAATTGTATACTACTCATTCCTTTTTTGGTTTATGTTGTCTTTAGTGTAA
TAAAAATGTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAAATAGAATGAAAATTTCATAATTTCTTTACTAATTGAGCCATTTAATTTTTAAATG
TTTATATTAGTAAGATAACCATATTTACAATGGGAACTTTTGATCTTGATAGTATTTATA
GTATAAACCAGCCTTGTTAATGAGTGTGTAAATTAAAATATTTACACATAAAAAAGTTCA
TATAATTAAATCGAGATGAATATAGTTTAGAACTATATCTTTAACACATTTTGGTTTCTG
CTCATTTTTACTAGCGTATCGTTGAAGCTGTGATCAGGAGATTACCCATATCTAAATACA
GTTAACAGATCAAGTTAACGGTTATATGACATTTTTAATTCATTCTAATGTTAGAAGCAT
ATAACTAAAGACTTTAGTTGTGAATTAAGAGTGTTACAACTTTTTACCAAGAGCAAAAAA
CCCTCAGTTTATTGTTTTACCTTAGGATCCAATCAGTAAAGTTATATATTTGCAAATATT
GCTATGACAACAAAACCTAATGTCTTTTTAAATGTTAATGATAAGCCTAACTTTTTTTCA
CTTATATATCTGATAAATATAATTTTTTTCAGCTTTAAAGCTTACAGCTTTCAAAAGAAA
ACAGTTCTTTAAATTGTATACTACTCATTCCTTTTTTGGTTTATGTTGTCTTTAGTGTAA
TAAAAATGTATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-666, gnl|bosTau2|chr11 (60202592-60201934)
               

               
               16-666, gnl|Hg17|chr2 (20114222-20113519)
               

               
               16-666, gnl|Mm7|chr12 (8997067-8997706)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-666, gnl|bosTau2|chr11 (60202592-60201934)
               

               
               16-666, gnl|Hg17|chr2 (20114222-20113519)
               

               
               16-666, gnl|Mm7|chr12 (8997067-8997706)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	16-666, gnl\|bosTau2\|chr11 (60202592-60201934)
	16-666, gnl\|Hg17\|chr2 (20114222-20113519)
	16-666, gnl\|Mm7\|chr12 (8997067-8997706)