Non-Coding RNA Search

Ss1.1-Pig1-83M08.5

Sequence:


               
               ATCCTGCCATCCCACCGCCTGCTGTGAGCAGGGCGTGCCACCCTCGGCAGTCACCAGGAT
GGCCAACGCAAGCAGGGGACAGAGAGGCACATGGGGAACGTGCTTGGGTGGTGGCGCCTG
CCCACCTCCTGCCAGGTCCTAAGGCATCTGAGGTGGGAATCACGGGGTGGGGAGCCTGGA
CCTCCTAGCTTCTGGCGGCAGCTGGGGTCTCTGGCTCAGAGAGGCCCGCCCCCCGGGCCC
CACCCTCCAGTAGGTCTCGGGGGTCCCTGAGGAAGACCACCATAACCGTGATGTTGTCGT
GGGAGCCCCGCTCTCGGGCTGCAGCCACCAGCTCCTCGGCCACGCGCTGCCCACTGCCCT
CCTGCCCGACCAGGTGGCTCTGCACAAGGCCAGCCACCTCCTGGTGAGGGACCACATCAA
AGAAGCCATCGCAGGCCAACAGCAGGTAATCCTCAGAGCCCGTCAGCTCCCGCGAGGCTG
CGTCCGCCTCCCCAGACACGTAGGGCTTCTGGAAGACGTCCCCGATGGCTCTGGAGACGG
CCAGTGTCCCATTGACTCTCCAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCCTGCCATCCCACCGCCTGCTGTGAGCAGGGCGTGCCACCCTCGGCAGTCACCAGGAT
GGCCAACGCAAGCAGGGGACAGAGAGGCACATGGGGAACGTGCTTGGGTGGTGGCGCCTG
CCCACCTCCTGCCAGGTCCTAAGGCATCTGAGGTGGGAATCACGGGGTGGGGAGCCTGGA
CCTCCTAGCTTCTGGCGGCAGCTGGGGTCTCTGGCTCAGAGAGGCCCGCCCCCCGGGCCC
CACCCTCCAGTAGGTCTCGGGGGTCCCTGAGGAAGACCACCATAACCGTGATGTTGTCGT
GGGAGCCCCGCTCTCGGGCTGCAGCCACCAGCTCCTCGGCCACGCGCTGCCCACTGCCCT
CCTGCCCGACCAGGTGGCTCTGCACAAGGCCAGCCACCTCCTGGTGAGGGACCACATCAA
AGAAGCCATCGCAGGCCAACAGCAGGTAATCCTCAGAGCCCGTCAGCTCCCGCGAGGCTG
CGTCCGCCTCCCCAGACACGTAGGGCTTCTGGAAGACGTCCCCGATGGCTCTGGAGACGG
CCAGTGTCCCATTGACTCTCCAGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61878937|ref|XP_602565.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61878937|ref|XP_602565.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               245-523, gnl|bosTau2|chr17 (45597791-45598069)
               

               
               245-523, gnl|Hg17|chr22 (20602121-20602399)
               

               
               245-523, gnl|Mm7|chr16 (16473559-16473281)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               245-523, gnl|bosTau2|chr17 (45597791-45598069)
               

               
               245-523, gnl|Hg17|chr22 (20602121-20602399)
               

               
               245-523, gnl|Mm7|chr16 (16473559-16473281)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pty (0.142714)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)

	245-523, gnl\|bosTau2\|chr17 (45597791-45598069)
	245-523, gnl\|Hg17\|chr22 (20602121-20602399)
	245-523, gnl\|Mm7\|chr16 (16473559-16473281)