Ss1.1-Pig1-84L16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTGATCCAGCATGCCAATGTCCAGGCGCACAGCAGCCTCATCCGGAACCTGGAGCAGC TGGGGGCCACTGTCACCAACCCGGGGGGCTCTGGGACCTCAAGCCGGCTGGAGCGGAGGG AGCGCTTGGAACCCACCTATCAGCTGTCTCGATGGACCCCGGTCGTCAAGGACGTGATGG AGGATGCCGTGGAGGACCGGCTGGATCGAAAGCTGTGGCCCTTTGTGTCTGACCCCGCCC CCATGCCCAGTTCCCAGGCTGCTGTCAGCGCCCGCTTTGGCCACTGGCACAAGAACAAGG CCGGCGTGGAGGCACGAGCTGGGCCCCGGCTTATCATCTACATTGTGGGAGGTGTGTCGA TGTCAGAGATGAGGGCTGCCTACGAGGTGACCAGGGCCACTGATGGCAAGTGGGAGGTGC TCATTGGCTCCTCCCACATCCTCACACCGACCCGCTTCCTGGATGACCTCAAGATGCTGG ACCAGAAGCTGGAGGACATTTCCCTGCCTTGACCCTCCCACCCCCATCTGACCTGCCCCC CTCCCTTTTTGGAGAAATAAACTCCTCCTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTGATCCAGCATGCCAATGTCCAGGCGCACAGCAGCCTCATCCGGAACCTGGAGCAGC TGGGGGCCACTGTCACCAACCCGGGGGGCTCTGGGACCTCAAGCCGGCTGGAGCGGAGGG AGCGCTTGGAACCCACCTATCAGCTGTCTCGATGGACCCCGGTCGTCAAGGACGTGATGG AGGATGCCGTGGAGGACCGGCTGGATCGAAAGCTGTGGCCCTTTGTGTCTGACCCCGCCC CCATGCCCAGTTCCCAGGCTGCTGTCAGCGCCCGCTTTGGCCACTGGCACAAGAACAAGG CCGGCGTGGAGGCACGAGCTGGGCCCCGGCTTATCATCTACATTGTGGGAGGTGTGTCGA TGTCAGAGATGAGGGCTGCCTACGAGGTGACCAGGGCCACTGATGGCAAGTGGGAGGTGC TCATTGGCTCCTCCCACATCCTCACACCGACCCGCTTCCTGGATGACCTCAAGATGCTGG ACCAGAAGCTGGAGGACATTTCCCTGCCTTGACCCTCCCACCCCCATCTGACCTGCCCCC CTCCCTTTTTGGAGAAATAAACTCCTCCTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 76-183, gnl|bosTau2|chr7 (12394673-12394780) | |
| 76-183, gnl|Hg17|chr19 (7617124-7617231) | |
| 76-183, gnl|Mm7|chr8 (3603586-3603693) | |
| 266-427, gnl|bosTau2|chr7 (12395667-12395828) | |
| 266-427, gnl|canFam2|chr20 (55422681-55422893) | |
| 266-427, gnl|danRer3|chrUn (55752089-55752254) | |
| 266-427, gnl|dasNov1|scaffold_162529 (193-403) | |
| 266-427, gnl|echTel1|scaffold_148982 (547-758) | |
| 266-427, gnl|fr1|chrUn (239848510-239848682) | |
| 266-427, gnl|hg17|chr19 (7618202-7618409) | |
| 266-427, gnl|Hg17|chr19 (7618237-7618398) | |
| 266-427, gnl|loxAfr1|scaffold_32227 (31440-31618) | |
| 266-427, gnl|mm7|chr8 (3604343-3604553) | |
| 266-427, gnl|Mm7|chr8 (3604383-3604542) | |
| 266-427, gnl|monDom2|scaffold_54 (502029-501818) | |
| 266-427, gnl|oryCun1|scaffold_151384 (3367-3157) | |
| 266-427, gnl|panTro1|chr20 (7968069-7968276) | |
| 266-427, gnl|rheMac2|chr15 (98901743-98901555) | |
| 266-427, gnl|rn3|chr12 (2512950-2512740) | |
| 266-427, gnl|tetNig1|chrUn_random (12661107-12660920) | |
| 266-427, gnl|xenTro1|scaffold_903 (209696-209492) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 76-183, gnl|bosTau2|chr7 (12394673-12394780) | |
| 76-183, gnl|Hg17|chr19 (7617124-7617231) | |
| 76-183, gnl|Mm7|chr8 (3603586-3603693) | |
| 266-427, gnl|bosTau2|chr7 (12395667-12395828) | |
| 266-427, gnl|canFam2|chr20 (55422681-55422893) | |
| 266-427, gnl|danRer3|chrUn (55752089-55752254) | |
| 266-427, gnl|dasNov1|scaffold_162529 (193-403) | |
| 266-427, gnl|echTel1|scaffold_148982 (547-758) | |
| 266-427, gnl|fr1|chrUn (239848510-239848682) | |
| 266-427, gnl|hg17|chr19 (7618202-7618409) | |
| 266-427, gnl|Hg17|chr19 (7618237-7618398) | |
| 266-427, gnl|loxAfr1|scaffold_32227 (31440-31618) | |
| 266-427, gnl|mm7|chr8 (3604343-3604553) | |
| 266-427, gnl|Mm7|chr8 (3604383-3604542) | |
| 266-427, gnl|monDom2|scaffold_54 (502029-501818) | |
| 266-427, gnl|oryCun1|scaffold_151384 (3367-3157) | |
| 266-427, gnl|panTro1|chr20 (7968069-7968276) | |
| 266-427, gnl|rheMac2|chr15 (98901743-98901555) | |
| 266-427, gnl|rn3|chr12 (2512950-2512740) | |
| 266-427, gnl|tetNig1|chrUn_random (12661107-12660920) | |
| 266-427, gnl|xenTro1|scaffold_903 (209696-209492) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| col (0.390016) | |
| lnt (0.284616) | |
| cag (0.151194) | |
| cov (0.132153) | |
| cty (0.10408) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.390016) | |
| lnt (0.284616) | |
| cag (0.151194) | |
| cov (0.132153) | |
| cty (0.10408) |