Ss1.1-Pig1-84O23.5
|
ACCCTGGGTTGTGGCCCCTGAGTCTGGAGCCACCGGTCCCCAGAGCACCCTCCACACTGA
GAGGGACGGCGACATGAGGAGGCTCCTCCTGGTCACCAGCCTGGTGGCTGTGTTGCTGCT
AGAGGCAGGCTCAGCCCCAACACCCCAGGCCCTTGTCAAGATCAAAGGCAAAGCCGGCGC
TGAGCAGGACATGGAAGAGGCCTGGAGCTCCGGGCTGGTGGATCCTCCGGGGAAGGACAA
GCAGTGGGAGCAGCTGCTCCAGGTCGCCTCCCAGGAGCAGCAGGAAGGTGCCAAGGCCCT
GGCAGGGAACAAGGACACCCTGGACCGTGTCCCAAGCCCCAAGTGGGGCCCTGAGCCCGA
CCGTGACCACCTGTACCACAGCTGGCCGCAGGAGGCCCAGGAGGAGGCCAGGCCCTGGGC
CCGGGCGCTGCCACCTCGCCAAGTGCTTCAAGGACCTGAGGAGGACCGAGACCACATCTA
CCACCCCAGGGGTGACTCCTGGGAGCCCTGACCCCTCCCCAGCTGGAGCAAATAAAGTCT
GCAAAGAGGAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACCCTGGGTTGTGGCCCCTGAGTCTGGAGCCACCGGTCCCCAGAGCACCCTCCACACTGA
GAGGGACGGCGACATGAGGAGGCTCCTCCTGGTCACCAGCCTGGTGGCTGTGTTGCTGCT
AGAGGCAGGCTCAGCCCCAACACCCCAGGCCCTTGTCAAGATCAAAGGCAAAGCCGGCGC
TGAGCAGGACATGGAAGAGGCCTGGAGCTCCGGGCTGGTGGATCCTCCGGGGAAGGACAA
GCAGTGGGAGCAGCTGCTCCAGGTCGCCTCCCAGGAGCAGCAGGAAGGTGCCAAGGCCCT
GGCAGGGAACAAGGACACCCTGGACCGTGTCCCAAGCCCCAAGTGGGGCCCTGAGCCCGA
CCGTGACCACCTGTACCACAGCTGGCCGCAGGAGGCCCAGGAGGAGGCCAGGCCCTGGGC
CCGGGCGCTGCCACCTCGCCAAGTGCTTCAAGGACCTGAGGAGGACCGAGACCACATCTA
CCACCCCAGGGGTGACTCCTGGGAGCCCTGACCCCTCCCCAGCTGGAGCAAATAAAGTCT
GCAAAGAGGAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
297-383, - strand, RNAmicro p=0.993432 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
297-383, - strand, RNAmicro p=0.993432 |
|
286-491, gnl|bosTau2|chr26 (34973604-34973399) |
|
286-491, gnl|canFam2|chr28 (43923651-43923893) |
|
286-491, gnl|hg17|chr10 (135054601-135054864) |
|
286-491, gnl|Hg17|chr10 (135054630-135054823) |
|
286-491, gnl|mm7|chr7 (136510638-136510917) |
|
286-491, gnl|Mm7|chr7 (136510667-136510872) |
|
286-491, gnl|panTro1|chr8 (137889316-137889579) |
|
286-491, gnl|rheMac2|chr9 (132988383-132988657) |
|
286-491, gnl|rn3|chr1 (200043070-200043349) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
286-491, gnl|bosTau2|chr26 (34973604-34973399) |
|
286-491, gnl|canFam2|chr28 (43923651-43923893) |
|
286-491, gnl|hg17|chr10 (135054601-135054864) |
|
286-491, gnl|Hg17|chr10 (135054630-135054823) |
|
286-491, gnl|mm7|chr7 (136510638-136510917) |
|
286-491, gnl|Mm7|chr7 (136510667-136510872) |
|
286-491, gnl|panTro1|chr8 (137889316-137889579) |
|
286-491, gnl|rheMac2|chr9 (132988383-132988657) |
|
286-491, gnl|rn3|chr1 (200043070-200043349) |
|
jej (3.26442) |
|
nje (1.6592) |
|
nco (0.970403) |
|
eje (0.889504) |
|
duo (0.518403) |
|
col (0.195008) |
|
ill (0.175593) |
|
ute (0.132784) |
|
jej (3.26442) |
|
nje (1.6592) |
|
nco (0.970403) |
|
eje (0.889504) |
|
duo (0.518403) |
|
col (0.195008) |
|
ill (0.175593) |
|
ute (0.132784) |
