Non-Coding RNA Search

Ss1.1-Pig1-84P03.5

Sequence:


               
               GGGTCACTCCTGGGCTTGGACTCAGGAGAGCTGCAGGGCGGCCCAGAGTTGAGCTCCGAC
CCCGGTGTGCACGTGAGACAGATAAAGGAGGCGCCGGCCAAGCTGGAGTCCCAGGCTGGG
CAGCAGGTGTGCCGCGGGGCCCGGGACCGGGTCCGCTCCATGTCTGGGGGCCACGGCCTT
CGTGTTGGCACCTTGGATGCTCCGGCCTCACACTTCCCAGGCAGCCCCTCTTCCCCGGGC
TCAGAGACTGCCCCAGCCGGCAAGCCCGAAAAGGCCTCGGCTGGCTCCCAGCTCCCTGCG
CAGAAGGAGAAAACAAACCTGGCGGCCTACATCCCCCTGTTGACCCAGGGCTGGGCGGAG
ATCTTGGTCCGAAGACCCACAGGGAACACCAGCTGGCTGATGAGCCTGGAGAACCCGCTC
AGCCCCTTCTCCTCGGACATCAACAACATGCCCCTGCAGGAGCTGTCCAATGCCCTCATG
GCCGCCGAGCGCTTCAAGGAGCGCCGGGATACGGCGCTGTACAAGTCCCTGTCGGTGCCG
CCTGGGGCCGGACCAGCGCCCAGCAGCCCCACCTATGTCCTTCCAGACTCTGCGGTGGTT
CTGGAGGAGGGAGGTCCAGGCGAGCCTGGTTGGCCAGTGGGGGTCCCCGAGTTGGAAGAC
TTGGAGGCGCCGCTAGACACAGGTCAGCGCTGCTGCCGCGCCGAAGCTTTCAGCAGGTCG
TCCTCAACCTCCAGCCAGGAGGAGAAGCTGTTCCACGCAGAGGACTTGGCAGCCGGGGGC
ATCCCCATCGAGCGGGCCGTCTCCTCGGAGGGCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTCACTCCTGGGCTTGGACTCAGGAGAGCTGCAGGGCGGCCCAGAGTTGAGCTCCGAC
CCCGGTGTGCACGTGAGACAGATAAAGGAGGCGCCGGCCAAGCTGGAGTCCCAGGCTGGG
CAGCAGGTGTGCCGCGGGGCCCGGGACCGGGTCCGCTCCATGTCTGGGGGCCACGGCCTT
CGTGTTGGCACCTTGGATGCTCCGGCCTCACACTTCCCAGGCAGCCCCTCTTCCCCGGGC
TCAGAGACTGCCCCAGCCGGCAAGCCCGAAAAGGCCTCGGCTGGCTCCCAGCTCCCTGCG
CAGAAGGAGAAAACAAACCTGGCGGCCTACATCCCCCTGTTGACCCAGGGCTGGGCGGAG
ATCTTGGTCCGAAGACCCACAGGGAACACCAGCTGGCTGATGAGCCTGGAGAACCCGCTC
AGCCCCTTCTCCTCGGACATCAACAACATGCCCCTGCAGGAGCTGTCCAATGCCCTCATG
GCCGCCGAGCGCTTCAAGGAGCGCCGGGATACGGCGCTGTACAAGTCCCTGTCGGTGCCG
CCTGGGGCCGGACCAGCGCCCAGCAGCCCCACCTATGTCCTTCCAGACTCTGCGGTGGTT
CTGGAGGAGGGAGGTCCAGGCGAGCCTGGTTGGCCAGTGGGGGTCCCCGAGTTGGAAGAC
TTGGAGGCGCCGCTAGACACAGGTCAGCGCTGCTGCCGCGCCGAAGCTTTCAGCAGGTCG
TCCTCAACCTCCAGCCAGGAGGAGAAGCTGTTCCACGCAGAGGACTTGGCAGCCGGGGGC
ATCCCCATCGAGCGGGCCGTCTCCTCGGAGGGCTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               153-383, gnl|bosTau2|chr25 (2801277-2801507)
               

               
               153-383, gnl|Hg17|chr16 (2070153-2070380)
               

               
               153-383, gnl|Mm7|chr17 (22784137-22783910)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               153-383, gnl|bosTau2|chr25 (2801277-2801507)
               

               
               153-383, gnl|Hg17|chr16 (2070153-2070380)
               

               
               153-383, gnl|Mm7|chr17 (22784137-22783910)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	153-383, gnl\|bosTau2\|chr25 (2801277-2801507)
	153-383, gnl\|Hg17\|chr16 (2070153-2070380)
	153-383, gnl\|Mm7\|chr17 (22784137-22783910)