Ss1.1-Pig1-86E07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGGGCGGGCCAGCGGGTTTATTCCACCCGGGNAGAAGCGCACACCAAGCCGCCACCAG CGCTGCTGCGGGATGCTGCGCTCCACGTCCACCGTCACTCTGTTCTCGGGCAGCGGCTCC AGGACGCCAGGGGCGCCCAGCAGAAGGGCAAATGTCTGCAGACTGCGGTTGACTGTTCCC CCGGAGAGTCCGGTGTCTGAGCCCAGTGAAAAGAAGCTGGAAAGAAAAGAGCAACATCGT GACCTGAGCAATGGAGAGCCCACCAGGAAACTCCCTCACGGTGTGGTCTATGGTGTGGTG CGGAGATCAGATCAAAACCAGCAGAAAGAAATGGTGGTATATGGGTGGACCACCAATCAG CTGAAGGAGGAGATGAACTACATCAAAGATGTGAGAGCCACTTTGGAAAAAGTAAGGAAG AGAATGTATGGAGACTACGATGAAATGAGACAGAAGATTCGGCAGCTCACCCAGGAACTG TCAATTTCACAGGCTCAGCAGGACTATCTAGAAAATCACATCCAAACTCAGTCGTCAGCC CTGGACAGTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGGGCGGGCCAGCGGGTTTATTCCACCCGGGNAGAAGCGCACACCAAGCCGCCACCAG CGCTGCTGCGGGATGCTGCGCTCCACGTCCACCGTCACTCTGTTCTCGGGCAGCGGCTCC AGGACGCCAGGGGCGCCCAGCAGAAGGGCAAATGTCTGCAGACTGCGGTTGACTGTTCCC CCGGAGAGTCCGGTGTCTGAGCCCAGTGAAAAGAAGCTGGAAAGAAAAGAGCAACATCGT GACCTGAGCAATGGAGAGCCCACCAGGAAACTCCCTCACGGTGTGGTCTATGGTGTGGTG CGGAGATCAGATCAAAACCAGCAGAAAGAAATGGTGGTATATGGGTGGACCACCAATCAG CTGAAGGAGGAGATGAACTACATCAAAGATGTGAGAGCCACTTTGGAAAAAGTAAGGAAG AGAATGTATGGAGACTACGATGAAATGAGACAGAAGATTCGGCAGCTCACCCAGGAACTG TCAATTTCACAGGCTCAGCAGGACTATCTAGAAAATCACATCCAAACTCAGTCGTCAGCC CTGGACAGTTTT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 277-395, + strand, RNAz p=0.853014 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 277-395, + strand, RNAz p=0.853014 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 17-128, gnl|bosTau2|chr10 (34792085-34791970) | |
| 17-128, gnl|Hg17|chr15 (55671466-55671589) | |
| 17-128, gnl|Mm7|chr9 (71627172-71627049) | |
| 232-395, gnl|bosTau2|chr10 (34740157-34739994) | |
| 232-395, gnl|Hg17|chr15 (55697520-55697683) | |
| 232-395, gnl|Mm7|chr9 (71599417-71599254) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 17-128, gnl|bosTau2|chr10 (34792085-34791970) | |
| 17-128, gnl|Hg17|chr15 (55671466-55671589) | |
| 17-128, gnl|Mm7|chr9 (71627172-71627049) | |
| 232-395, gnl|bosTau2|chr10 (34740157-34739994) | |
| 232-395, gnl|Hg17|chr15 (55697520-55697683) | |
| 232-395, gnl|Mm7|chr9 (71599417-71599254) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hlv (0.139256) |