Ss1.1-Pig1-87J21.5
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TTCATGCACGGGCCCCCCCAGCTCTCCCATCCCCCGGATATGCCCAACAACATGGCCGCC
CTCGAGAAGCCCCTCAGTCACCCCATGCAGGAGACTATGCCACACGCTGGCAGTTCTGAC
CAGCCCCATCCCTCCATACAACAAGGTTTGCACGTCCCACACCCCAGCAGCCAGTCAGGG
CCTCCATTACATCACAGTGGGGCTCCTCCTCCTCCTTCCCAGCCTCCCCGGCAACCGCCA
CAGGCCGCTCCCAGCAACCATCCACACAGCGACCTGACCTTTAACCCCTCCTCAGCCTTA
GAGGGTCAGGCCGGAGCGCAGGGAGCGTCCGACATGCCGGAGCCTTCGCTGGATCTCCTT
CCAGAACTCACAAACCCGGACGAGCTCCTCTCGTACCTGGACCCCCCCGACCTGCCGAGC
AATAGTAACGATGACCTCCTGTCTCTCTTTGAGAACAACTGAAGCCCACCCCTCCGACGG
GGCCACCCCTCCCCACACGACCTCCTTTCCCGTCTGCCCCACATACACCTTCCCGCTGGG
AGCCCGTGCCCTCGGACCGCCGCCTTCTCAGTGTGGAGGGGCGGGAGGGTGCACTGTGAA
GGCGCCGTGGGTCTGGAGCCCACGGCCAGAGCAGGCCCCGAAGATGACCCTCGAGATGAA
GATGACCCTCGAGACGGGGCGCCGGCCCAGGGCGGGGGCACATGCTGACGGCGGCTTCCG
AACGACCCTCCAGTGCCCCCAGGTTCTTCCAGTTTCTAAACTGTAACCCGGCCTCCCCGC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCATGCACGGGCCCCCCCAGCTCTCCCATCCCCCGGATATGCCCAACAACATGGCCGCC
CTCGAGAAGCCCCTCAGTCACCCCATGCAGGAGACTATGCCACACGCTGGCAGTTCTGAC
CAGCCCCATCCCTCCATACAACAAGGTTTGCACGTCCCACACCCCAGCAGCCAGTCAGGG
CCTCCATTACATCACAGTGGGGCTCCTCCTCCTCCTTCCCAGCCTCCCCGGCAACCGCCA
CAGGCCGCTCCCAGCAACCATCCACACAGCGACCTGACCTTTAACCCCTCCTCAGCCTTA
GAGGGTCAGGCCGGAGCGCAGGGAGCGTCCGACATGCCGGAGCCTTCGCTGGATCTCCTT
CCAGAACTCACAAACCCGGACGAGCTCCTCTCGTACCTGGACCCCCCCGACCTGCCGAGC
AATAGTAACGATGACCTCCTGTCTCTCTTTGAGAACAACTGAAGCCCACCCCTCCGACGG
GGCCACCCCTCCCCACACGACCTCCTTTCCCGTCTGCCCCACATACACCTTCCCGCTGGG
AGCCCGTGCCCTCGGACCGCCGCCTTCTCAGTGTGGAGGGGCGGGAGGGTGCACTGTGAA
GGCGCCGTGGGTCTGGAGCCCACGGCCAGAGCAGGCCCCGAAGATGACCCTCGAGATGAA
GATGACCCTCGAGACGGGGCGCCGGCCCAGGGCGGGGGCACATGCTGACGGCGGCTTCCG
AACGACCCTCCAGTGCCCCCAGGTTCTTCCAGTTTCTAAACTGTAACCCGGCCTCCCCGC |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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97-354, gnl|bosTau2|chr28 (27872230-27872487) |
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97-354, gnl|canFam2|chr4 (32243376-32243650) |
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97-354, gnl|danRer3|chr13 (31722707-31722981) |
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97-354, gnl|dasNov1|scaffold_219524 (3867-3596) |
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97-354, gnl|echTel1|scaffold_283552 (1881-1601) |
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97-354, gnl|fr1|chrUn (53319381-53319655) |
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97-354, gnl|galGal2|chr6 (11522619-11522354) |
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97-354, gnl|hg17|chr10 (80740683-80740960) |
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97-354, gnl|Hg17|chr10 (80740687-80740947) |
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97-354, gnl|loxAfr1|scaffold_72164 (971-1226) |
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97-354, gnl|mm7|chr14 (23332449-23332720) |
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97-354, gnl|Mm7|chr14 (23332453-23332707) |
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97-354, gnl|monDom2|scaffold_14 (8882272-8882573) |
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97-354, gnl|panTro1|chr8 (82132742-82133019) |
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97-354, gnl|rheMac2|chr9 (57761881-57761604) |
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97-354, gnl|rn3|chr16 (1239758-1240029) |
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97-354, gnl|tetNig1|chr2_random (876286-875979) |
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97-354, gnl|xenTro1|scaffold_841 (76415-76663) |
| |
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355-780, gnl|bosTau2|chr28 (27873910-27874323) |
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355-780, gnl|Hg17|chr10 (80742405-80742920) |
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355-780, gnl|Mm7|chr14 (23334126-23334598) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
97-354, gnl|bosTau2|chr28 (27872230-27872487) |
|
97-354, gnl|canFam2|chr4 (32243376-32243650) |
|
97-354, gnl|danRer3|chr13 (31722707-31722981) |
|
97-354, gnl|dasNov1|scaffold_219524 (3867-3596) |
|
97-354, gnl|echTel1|scaffold_283552 (1881-1601) |
|
97-354, gnl|fr1|chrUn (53319381-53319655) |
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97-354, gnl|galGal2|chr6 (11522619-11522354) |
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97-354, gnl|hg17|chr10 (80740683-80740960) |
|
97-354, gnl|Hg17|chr10 (80740687-80740947) |
|
97-354, gnl|loxAfr1|scaffold_72164 (971-1226) |
|
97-354, gnl|mm7|chr14 (23332449-23332720) |
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97-354, gnl|Mm7|chr14 (23332453-23332707) |
|
97-354, gnl|monDom2|scaffold_14 (8882272-8882573) |
|
97-354, gnl|panTro1|chr8 (82132742-82133019) |
|
97-354, gnl|rheMac2|chr9 (57761881-57761604) |
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97-354, gnl|rn3|chr16 (1239758-1240029) |
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97-354, gnl|tetNig1|chr2_random (876286-875979) |
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97-354, gnl|xenTro1|scaffold_841 (76415-76663) |
| |
|
355-780, gnl|bosTau2|chr28 (27873910-27874323) |
|
355-780, gnl|Hg17|chr10 (80742405-80742920) |
|
355-780, gnl|Mm7|chr14 (23334126-23334598) |
