Ss1.1-Pig1-89D18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAGGTGGCAGCTGCCTCCCCTAGACAGGCTCATCCACCATGACCAAACTGAACGCCCAG GTCAAAGGCTCCCTCAATGTCACCACGCCCGGGGTGCAGATATGGAGGATAGAGGCCATG CAGATGGTACCTGTTTCTTCCAGCACCTATGGCAGCTTCTTCGACGGTGACTGCTACATA GTCCTGGCTATCCACAAGACGGGCAGCAACCTGTCCTATGACATTCATTACTGGATCGGC CAGGACTCGTCCCAGGATGAGCAAGGAGCAGCTGCCATCTACACGACTCTGATGGATGAC TTTCTGAAGGGCCGGGCTGTCCAGCACCGCGAGGTCCAGGGCAACGAGAGCGAGGCCTTC CGAGGCTACTTCAAACAGGGCATCGTCATCCGGAAAGGGGGTGTAGCTTCTGGCATGAAG AAGGTGGAGACCAACTCCTACGACATCCAGCGGCTGCTGCACGTCAAGGGCAAGAGGAAC GTGGTGGCCGGAGAGGTGGAGATGTCCTGGAAAAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAGGTGGCAGCTGCCTCCCCTAGACAGGCTCATCCACCATGACCAAACTGAACGCCCAG GTCAAAGGCTCCCTCAATGTCACCACGCCCGGGGTGCAGATATGGAGGATAGAGGCCATG CAGATGGTACCTGTTTCTTCCAGCACCTATGGCAGCTTCTTCGACGGTGACTGCTACATA GTCCTGGCTATCCACAAGACGGGCAGCAACCTGTCCTATGACATTCATTACTGGATCGGC CAGGACTCGTCCCAGGATGAGCAAGGAGCAGCTGCCATCTACACGACTCTGATGGATGAC TTTCTGAAGGGCCGGGCTGTCCAGCACCGCGAGGTCCAGGGCAACGAGAGCGAGGCCTTC CGAGGCTACTTCAAACAGGGCATCGTCATCCGGAAAGGGGGTGTAGCTTCTGGCATGAAG AAGGTGGAGACCAACTCCTACGACATCCAGCGGCTGCTGCACGTCAAGGGCAAGAGGAAC GTGGTGGCCGGAGAGGTGGAGATGTCCTGGAAAAGT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 190-308, - strand, RNAz p=0.528322 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 190-308, - strand, RNAz p=0.528322 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 190-386, gnl|bosTau2|chr2 (59657043-59656847) | |
| 190-386, gnl|Hg17|chr2 (219115843-219116039) | |
| 190-386, gnl|Mm7|chr1 (74658033-74658229) | |
| 388-499, gnl|bosTau2|chr2 (59656243-59656132) | |
| 388-499, gnl|Hg17|chr2 (219118194-219118305) | |
| 388-499, gnl|Mm7|chr1 (74659243-74659354) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 190-386, gnl|bosTau2|chr2 (59657043-59656847) | |
| 190-386, gnl|Hg17|chr2 (219115843-219116039) | |
| 190-386, gnl|Mm7|chr1 (74658033-74658229) | |
| 388-499, gnl|bosTau2|chr2 (59656243-59656132) | |
| 388-499, gnl|Hg17|chr2 (219118194-219118305) | |
| 388-499, gnl|Mm7|chr1 (74659243-74659354) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.195008) | |
| nco (0.161734) |