Non-Coding RNA Search

Ss1.1-Pig1-89N09.5

Sequence:


               
               GGGTGGGCGAGGCAAGCCAGAGAAACAGGAGGCCTGGCTGCAGCTTCTGTGGCAGAGCCT
GCCTCTCAGCTTCCCATTCTCTTTTTCAGCACCCAGCCCAGCCCCCATCAGGACTCCTGG
GGCCTGCTGTGCCTGACCAAGCATGGGCCGCAAGCAGCCAGTGACCTGTGATCCTGCTTT
GAGTCCGTGCCACCTGTCAGACCCGCCTCATCTCTGGGCTTCCAATCCCAGCCCCCACCT
CCGGTGCACCTCCGGAGGTGCACAGGAGCTTGGCCTGCTGGCTAGGACCCCAGTCAGAAC
TGGCACTCCTCCAAGCCTGGCACAGTGAGCCCACCAGCCCAGATGGCTGATCTTACCACA
CCCTCTCGGTACCAGGAATGGGCTGCTCCCCCAGCAGCTCTGCTTGAGAATCACTGAACT
TTATATACAATAAATAGGCCTTGAGACTGAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTGGGCGAGGCAAGCCAGAGAAACAGGAGGCCTGGCTGCAGCTTCTGTGGCAGAGCCT
GCCTCTCAGCTTCCCATTCTCTTTTTCAGCACCCAGCCCAGCCCCCATCAGGACTCCTGG
GGCCTGCTGTGCCTGACCAAGCATGGGCCGCAAGCAGCCAGTGACCTGTGATCCTGCTTT
GAGTCCGTGCCACCTGTCAGACCCGCCTCATCTCTGGGCTTCCAATCCCAGCCCCCACCT
CCGGTGCACCTCCGGAGGTGCACAGGAGCTTGGCCTGCTGGCTAGGACCCCAGTCAGAAC
TGGCACTCCTCCAAGCCTGGCACAGTGAGCCCACCAGCCCAGATGGCTGATCTTACCACA
CCCTCTCGGTACCAGGAATGGGCTGCTCCCCCAGCAGCTCTGCTTGAGAATCACTGAACT
TTATATACAATAAATAGGCCTTGAGACTGAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-452, gnl|bosTau2|chr3 (9072855-9073313)
               

               
               2-452, gnl|Hg17|chr1 (151779397-151779860)
               

               
               2-452, gnl|Mm7|chr3 (89529064-89528649)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-452, gnl|bosTau2|chr3 (9072855-9073313)
               

               
               2-452, gnl|Hg17|chr1 (151779397-151779860)
               

               
               2-452, gnl|Mm7|chr3 (89529064-89528649)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eye (0.170503)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	2-452, gnl\|bosTau2\|chr3 (9072855-9073313)
	2-452, gnl\|Hg17\|chr1 (151779397-151779860)
	2-452, gnl\|Mm7\|chr3 (89529064-89528649)