Non-Coding RNA Search

Ss1.1-Pig1-89O02.5

Sequence:


               
               TCTCCCAACTTACTCAACATCAGA------------------------------------
------------------------------------------------------------
------------------------------------CATTTAGACAACATTCACACCTTA
CTTACCATCAGCGAGTTCATAATGTTACTAAATTATGAGAAAGCCATCTACGTGAAATTT
GTCTTAAGGAGCATTAGAAAATAAATTCTAAAAAGTGTTTGGATGTAGGAATCACTTTTG
CTTCATGTTCACAGTTAATATAAGAGGTTTTATTTAAAAGAGAAGTTTAATAAATATATA
GATGTATTTCATCACCATTCAAACTCTGTTCAACTTTAGGGGATTCATCCCAGAAAGAAG
CTCTCTTCGGGGAGTGAATGTGGAAAAGCTTTTGATTACCTGTTACCACCTCTATTCTTT
CATCTCTACAGTATACCTCTGGGGGTTGCCAGCACACCATCTCATTTTGGAAATGATAAA
TACAGGGAAAGAAAAGTCATTTACCCTGCATTTCCTGTATAAACTGTATTTTAAGGCAAC
TAGAAGTTGATGAGGTAAAGTTCTTAGAGAATTTTACAACACATAGTAAAACAATGGATC
TAAGCACAAGTCTCAGTAGAAGTTTAAGGCACTTAGGTGAACGGTGGATATGAACTTCGT
AGTGAATAGATCAGGTTCACAACATCTGAACCCACTGATCAATTTTAATCTCATCAAAAA
TAGGACAAAAGGTTTTATGCTTCCTAATAAGATATAAGACATACCATTGCCAAAAATTTG
TACCTGAATCTAAGGATCAAGATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCCCAACTTACTCAACATCAGA------------------------------------
------------------------------------------------------------
------------------------------------CATTTAGACAACATTCACACCTTA
CTTACCATCAGCGAGTTCATAATGTTACTAAATTATGAGAAAGCCATCTACGTGAAATTT
GTCTTAAGGAGCATTAGAAAATAAATTCTAAAAAGTGTTTGGATGTAGGAATCACTTTTG
CTTCATGTTCACAGTTAATATAAGAGGTTTTATTTAAAAGAGAAGTTTAATAAATATATA
GATGTATTTCATCACCATTCAAACTCTGTTCAACTTTAGGGGATTCATCCCAGAAAGAAG
CTCTCTTCGGGGAGTGAATGTGGAAAAGCTTTTGATTACCTGTTACCACCTCTATTCTTT
CATCTCTACAGTATACCTCTGGGGGTTGCCAGCACACCATCTCATTTTGGAAATGATAAA
TACAGGGAAAGAAAAGTCATTTACCCTGCATTTCCTGTATAAACTGTATTTTAAGGCAAC
TAGAAGTTGATGAGGTAAAGTTCTTAGAGAATTTTACAACACATAGTAAAACAATGGATC
TAAGCACAAGTCTCAGTAGAAGTTTAAGGCACTTAGGTGAACGGTGGATATGAACTTCGT
AGTGAATAGATCAGGTTCACAACATCTGAACCCACTGATCAATTTTAATCTCATCAAAAA
TAGGACAAAAGGTTTTATGCTTCCTAATAAGATATAAGACATACCATTGCCAAAAATTTG
TACCTGAATCTAAGGATCAAGATC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               22-685, gnl|bosTau2|chr18 (44240799-44241473)
               

               
               22-685, gnl|Hg17|chr19 (42817735-42817066)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-685, gnl|bosTau2|chr18 (44240799-44241473)
               

               
               22-685, gnl|Hg17|chr19 (42817735-42817066)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	22-685, gnl\|bosTau2\|chr18 (44240799-44241473)
	22-685, gnl\|Hg17\|chr19 (42817735-42817066)