Non-Coding RNA Search

Ss1.1-Pig1-90F05.5

Sequence:


               
               GAGTTCTCTGGTTCTGGTTACTCTGCGATATCTTTGTTCCCCTGTGATCTGCACTGGTCG
TTGGAGTCGTTAGGAGGTACTCAGACCCAGGAAACG------------------------
------------------------------------------------CACAGAGGAAAC
TCTACAGAGATGTGATGCAGGAAACCTTCAGGAACCTGTCTTTAATAGGAACCAAATGGA
AAGATCATGACATTGAAGATCAGTACAAAAACCCAGGGAGGAAATTAAGAAGTGCCATGG
TAAAGAGACTTCCTGAAAGTAAAGACAGTAGTTCATGTGGAAAAAACTTCAACCTTATTC
CAACTCTCAATCTAAACCAAAAAACTCCTGGATTGAAATCATGTAAATGCAGTACATGTG
AAAAAGTCTTTATGGATCATTCATCCCTTCATAAACATATGAGATGTCACACTGAACACA
AACCACAAGAGTATCAAAAATGCAATGAGAAGGTATCTAAATGTAAAGAATGTGGGAAAG
CATTCATTTATCTCAGTTCTCTTAGAACACATGAAAGCAGTCACACTGGAGAGAAACCCT
ATGAATGTAAACAGTGTGGAAAAGCCTTTCTATATCAAAAAACCTTCCAGGCACACAGAA
GAACTCACATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTTCTCTGGTTCTGGTTACTCTGCGATATCTTTGTTCCCCTGTGATCTGCACTGGTCG
TTGGAGTCGTTAGGAGGTACTCAGACCCAGGAAACG------------------------
------------------------------------------------CACAGAGGAAAC
TCTACAGAGATGTGATGCAGGAAACCTTCAGGAACCTGTCTTTAATAGGAACCAAATGGA
AAGATCATGACATTGAAGATCAGTACAAAAACCCAGGGAGGAAATTAAGAAGTGCCATGG
TAAAGAGACTTCCTGAAAGTAAAGACAGTAGTTCATGTGGAAAAAACTTCAACCTTATTC
CAACTCTCAATCTAAACCAAAAAACTCCTGGATTGAAATCATGTAAATGCAGTACATGTG
AAAAAGTCTTTATGGATCATTCATCCCTTCATAAACATATGAGATGTCACACTGAACACA
AACCACAAGAGTATCAAAAATGCAATGAGAAGGTATCTAAATGTAAAGAATGTGGGAAAG
CATTCATTTATCTCAGTTCTCTTAGAACACATGAAAGCAGTCACACTGGAGAGAAACCCT
ATGAATGTAAACAGTGTGGAAAAGCCTTTCTATATCAAAAAACCTTCCAGGCACACAGAA
GAACTCACATAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               234-597, gnl|bosTau2|chr4 (42315571-42315210)
               

               
               234-597, gnl|Hg17|chr19 (12437535-12437165)
               

               
               234-597, gnl|Mm7|chr9 (22078614-22078971)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               234-597, gnl|bosTau2|chr4 (42315571-42315210)
               

               
               234-597, gnl|Hg17|chr19 (12437535-12437165)
               

               
               234-597, gnl|Mm7|chr9 (22078614-22078971)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               liv (0.146284)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	234-597, gnl\|bosTau2\|chr4 (42315571-42315210)
	234-597, gnl\|Hg17\|chr19 (12437535-12437165)
	234-597, gnl\|Mm7\|chr9 (22078614-22078971)