Non-Coding RNA Search

Ss1.1-Pig1-90J15.5

Sequence:


               
               CGAGAGCGCTGCCGGCCGCCAGAGCTGGCCTGAAAACGGCCTGGGAATGGCCAGTGAGAG
AGACCAGTAAATGGCCTCGCCTCATGCTTCTGTTCAGATTGCGTTCTGTGACCCTCTGGG
TGCGGCGCTTTTGATTTCTGTGGGTGTGTGGGAGAGAGTGGATGCAGGAAAGGATGTAGA
ATTGATTTGGTCTTCACGGGGGAGGGCAGGGTACTGTGGGATGCACAGTGAGGCAGTGAG
TGAGATGGGGCCACAGTTGCAGAAGGGAAGCCTGGGTGAAAGCCCACCTTGCCCGCGAGC
GGCCACCCAGAGTTGATCTTTTCGCGTCTACAGGATCCTCTTACTCGCAGCCAGCGGGGT
GAGGAACAGGACAGGAACTCCAGGAGGGGGCATGATCCTCCATCCTTCTGGAGACAAATC
TGGTAATGGGATTTGCTGTGTTTTTTTCATGTGTGTGTGTGCGCGCGCGTCTCGCGTGTG
AACGTACGTGTGTGGCCCTGTTCGTGGTGACCCTCCAGTGTCCCCGGAGCTGAAGGATCG
CAAAGAGGATGCGAAAGGGATGGAGGACGAAGGCCAGACCAAAATCAAGCAGAGGCGAAG
TCGGACCAATTTCACCCTAGAACAAACTCACGAGCTGGAGAGGCTTTTTGACGAGACTCA
CTACCCGGATGCCTTTATGCGCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGAGCGCTGCCGGCCGCCAGAGCTGGCCTGAAAACGGCCTGGGAATGGCCAGTGAGAG
AGACCAGTAAATGGCCTCGCCTCATGCTTCTGTTCAGATTGCGTTCTGTGACCCTCTGGG
TGCGGCGCTTTTGATTTCTGTGGGTGTGTGGGAGAGAGTGGATGCAGGAAAGGATGTAGA
ATTGATTTGGTCTTCACGGGGGAGGGCAGGGTACTGTGGGATGCACAGTGAGGCAGTGAG
TGAGATGGGGCCACAGTTGCAGAAGGGAAGCCTGGGTGAAAGCCCACCTTGCCCGCGAGC
GGCCACCCAGAGTTGATCTTTTCGCGTCTACAGGATCCTCTTACTCGCAGCCAGCGGGGT
GAGGAACAGGACAGGAACTCCAGGAGGGGGCATGATCCTCCATCCTTCTGGAGACAAATC
TGGTAATGGGATTTGCTGTGTTTTTTTCATGTGTGTGTGTGCGCGCGCGTCTCGCGTGTG
AACGTACGTGTGTGGCCCTGTTCGTGGTGACCCTCCAGTGTCCCCGGAGCTGAAGGATCG
CAAAGAGGATGCGAAAGGGATGGAGGACGAAGGCCAGACCAAAATCAAGCAGAGGCGAAG
TCGGACCAATTTCACCCTAGAACAAACTCACGAGCTGGAGAGGCTTTTTGACGAGACTCA
CTACCCGGATGCCTTTATGCGCGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47211731|emb|CAF93310.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47211731|emb|CAF93310.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-684, gnl|bosTau2|chr1 (9981980-9981279)
               

               
               1-684, gnl|Hg17|chr3 (159303892-159303212)
               

               
               1-684, gnl|Mm7|chr3 (67079913-67079235)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-684, gnl|bosTau2|chr1 (9981980-9981279)
               

               
               1-684, gnl|Hg17|chr3 (159303892-159303212)
               

               
               1-684, gnl|Mm7|chr3 (67079913-67079235)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nca (0.136874)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)
               

               
               jca (0.11396)

	1-684, gnl\|bosTau2\|chr1 (9981980-9981279)
	1-684, gnl\|Hg17\|chr3 (159303892-159303212)
	1-684, gnl\|Mm7\|chr3 (67079913-67079235)