Non-Coding RNA Search

Ss1.1-Pig1-93F22.5

Sequence:


               
               TCGAAGTCGCAGCTTTCCGGGTCACTGCTCGCCGCTCTCAGAGGCGCCCAGCCTGCTGCT
CTTCCCCGGTCTCGGTCCAGATCCCGGCATGCCTTCTGAGACACCCCAGGCGGAAGAGAG
GGCTGCGGGGTGCCCCCGCCTCTCCGCGGCACACTTGCGGAAAGGCAGCCTGGAAAAGCG
GCCTCCGGGGGACAAGGACACCAAGGAGCACCTGTGGATCAGTCCTGACACCCCGAGCAG
GTGCCTCTGGCAGCTGGGCAGGCCCGTCACCGACTCTCCACACCACCACACCACCTTGGC
AAAATCCCCCCAAATCTTGCCAGATATCCTGAAGAAAATTGGGGACACCCCCATGGTGAG
AATCAACAAGATCGGGAGACGCTTCGGTCTGAAGTGTGAGCTCCTGGCCAAGTGCGAGTT
CTTCAACGCTGGCGGGAGCGTCAAGGACCGCATCAGCCTTCGGATGGTCGAGGACGCAGA
GCGCGCTGGGACCCTGAAGCCTGGGGACACCATCATTGAGCCGACGTCGGGGAACACAGG
GATCGGGCTGGCCCTGGCCGCTGCCGTGAAGGGCTACCGCTGTATCATCGTGATGCCGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGAAGTCGCAGCTTTCCGGGTCACTGCTCGCCGCTCTCAGAGGCGCCCAGCCTGCTGCT
CTTCCCCGGTCTCGGTCCAGATCCCGGCATGCCTTCTGAGACACCCCAGGCGGAAGAGAG
GGCTGCGGGGTGCCCCCGCCTCTCCGCGGCACACTTGCGGAAAGGCAGCCTGGAAAAGCG
GCCTCCGGGGGACAAGGACACCAAGGAGCACCTGTGGATCAGTCCTGACACCCCGAGCAG
GTGCCTCTGGCAGCTGGGCAGGCCCGTCACCGACTCTCCACACCACCACACCACCTTGGC
AAAATCCCCCCAAATCTTGCCAGATATCCTGAAGAAAATTGGGGACACCCCCATGGTGAG
AATCAACAAGATCGGGAGACGCTTCGGTCTGAAGTGTGAGCTCCTGGCCAAGTGCGAGTT
CTTCAACGCTGGCGGGAGCGTCAAGGACCGCATCAGCCTTCGGATGGTCGAGGACGCAGA
GCGCGCTGGGACCCTGAAGCCTGGGGACACCATCATTGAGCCGACGTCGGGGAACACAGG
GATCGGGCTGGCCCTGGCCGCTGCCGTGAAGGGCTACCGCTGTATCATCGTGATGCCGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q561Y3_BRARE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q561Y3_BRARE

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               55-298, gnl|bosTau2|chr28 (9910970-9910721)
               

               
               55-298, gnl|Hg17|chr21 (43365401-43365163)
               

               
               55-298, gnl|Mm7|chr17 (29823978-29823750)
               


               
               405-540, gnl|bosTau2|chr28 (9904118-9903983)
               

               
               405-540, gnl|Hg17|chr21 (43359556-43359421)
               

               
               405-540, gnl|Mm7|chr17 (29816940-29816805)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               55-298, gnl|bosTau2|chr28 (9910970-9910721)
               

               
               55-298, gnl|Hg17|chr21 (43365401-43365163)
               

               
               55-298, gnl|Mm7|chr17 (29823978-29823750)
               


               
               405-540, gnl|bosTau2|chr28 (9904118-9903983)
               

               
               405-540, gnl|Hg17|chr21 (43359556-43359421)
               

               
               405-540, gnl|Mm7|chr17 (29816940-29816805)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.20816)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.20816)

	55-298, gnl\|bosTau2\|chr28 (9910970-9910721)
	55-298, gnl\|Hg17\|chr21 (43365401-43365163)
	55-298, gnl\|Mm7\|chr17 (29823978-29823750)

	405-540, gnl\|bosTau2\|chr28 (9904118-9903983)
	405-540, gnl\|Hg17\|chr21 (43359556-43359421)
	405-540, gnl\|Mm7\|chr17 (29816940-29816805)