Non-Coding RNA Search

Ss1.1-Pig1-93G14.5

Sequence:


               
               GAAAAGGAACTAATGCCCCAGCCCTCATTTCTGCTGTGTCCACTGCCTGAAGAACATGGT
GCATGAAGTTGGGCAGGCACCTGGGGGTGGGGGGCAGTCTCCAAGCCATGTGCTCAGCAC
ACACGTGCAATGCACACAAAGAAATGACATGGAAATAGATGCAGGCAGGCTGGTCCTTGC
TGTGATTAATGAGTAACTCCAAGGACAAGGCCAACCACAATGGATGCTACAAAAACACTG
ACTGAGGCAAAGGTTTTTAATTTTTTATTTCTTTATCCTTTTGTTGTTATTGTTGGGAGG
GGGAGGGGGTGGGGCGTGTGTTTTTTCCCCTTGGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAAGGAACTAATGCCCCAGCCCTCATTTCTGCTGTGTCCACTGCCTGAAGAACATGGT
GCATGAAGTTGGGCAGGCACCTGGGGGTGGGGGGCAGTCTCCAAGCCATGTGCTCAGCAC
ACACGTGCAATGCACACAAAGAAATGACATGGAAATAGATGCAGGCAGGCTGGTCCTTGC
TGTGATTAATGAGTAACTCCAAGGACAAGGCCAACCACAATGGATGCTACAAAAACACTG
ACTGAGGCAAAGGTTTTTAATTTTTTATTTCTTTATCCTTTTGTTGTTATTGTTGGGAGG
GGGAGGGGGTGGGGCGTGTGTTTTTTCCCCTTGGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-336, gnl|bosTau2|chr7 (25543237-25542906)
               

               
               1-336, gnl|Hg17|chr5 (115808525-115808202)
               

               
               1-336, gnl|Mm7|chr18 (47624130-47623784)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-336, gnl|bosTau2|chr7 (25543237-25542906)
               

               
               1-336, gnl|Hg17|chr5 (115808525-115808202)
               

               
               1-336, gnl|Mm7|chr18 (47624130-47623784)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.271592)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               lnt (0.142308)

	1-336, gnl\|bosTau2\|chr7 (25543237-25542906)
	1-336, gnl\|Hg17\|chr5 (115808525-115808202)
	1-336, gnl\|Mm7\|chr18 (47624130-47623784)