Non-Coding RNA Search

Ss1.1-Pig1-93P23.5

Sequence:


               
               AAGAGGTAAAACAAAGAATTGAATAAACACATCTTAACCATTTCATGAATTGTTCTGAGC
TTAATTTTCTACTGAAACAACCTAGACCTGTATTTGTTAAATCCATTTTCTGTTCTGATA
TTCCACAATAACACCAAACCTCACAGAAGAAAAAACTAAACGTTTCTGTTCTGTTTTTAG
GTTGACATTAGAATGAAGTATATGCTCTTTCTATACTTATTTCACAGATTGTAACTTCAC
ATGCTTATTTGGTAGTACATAAATGTGTCAAAATATAATATTGTTCATGCCTGTAAATGT
AAAAATAATGTACATAAACCTGAAGTACTCAATTCTATAACCTTTCATGGTAGTAAAAAA
TATTGTATCTCATTACTAGTACATTTGAGTTCTTTATTTTTTTAATTTTAGAAATATTAT
AGTTCACATTGCAATATTCCCTTTTAACTTGCTATTTTAAAAGGGCATTGTAAATATGAA
AGTATTCATAAAGTGAATTTCTATTTTTTTCTGTTCAGAAAAGTACACATTTAAAAGTGT
TATTTATAACAAAGAAGCCACTGAGAACTGTAGAAACTTTCACAGTGGATCTATTTTCTG
ACAGTTTTCCACTCTTTAAAACATATCTGCTAAAATGTAGAGCTTCTGTCTCTCTTCAAA
TCTCATCAAAATAAAGAAGCAGTGATTTTATTTCAAAAAGTATGTAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAGGTAAAACAAAGAATTGAATAAACACATCTTAACCATTTCATGAATTGTTCTGAGC
TTAATTTTCTACTGAAACAACCTAGACCTGTATTTGTTAAATCCATTTTCTGTTCTGATA
TTCCACAATAACACCAAACCTCACAGAAGAAAAAACTAAACGTTTCTGTTCTGTTTTTAG
GTTGACATTAGAATGAAGTATATGCTCTTTCTATACTTATTTCACAGATTGTAACTTCAC
ATGCTTATTTGGTAGTACATAAATGTGTCAAAATATAATATTGTTCATGCCTGTAAATGT
AAAAATAATGTACATAAACCTGAAGTACTCAATTCTATAACCTTTCATGGTAGTAAAAAA
TATTGTATCTCATTACTAGTACATTTGAGTTCTTTATTTTTTTAATTTTAGAAATATTAT
AGTTCACATTGCAATATTCCCTTTTAACTTGCTATTTTAAAAGGGCATTGTAAATATGAA
AGTATTCATAAAGTGAATTTCTATTTTTTTCTGTTCAGAAAAGTACACATTTAAAAGTGT
TATTTATAACAAAGAAGCCACTGAGAACTGTAGAAACTTTCACAGTGGATCTATTTTCTG
ACAGTTTTCCACTCTTTAAAACATATCTGCTAAAATGTAGAGCTTCTGTCTCTCTTCAAA
TCTCATCAAAATAAAGAAGCAGTGATTTTATTTCAAAAAGTATGTAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               15-708, gnl|bosTau2|chr3 (43882545-43883231)
               

               
               15-708, gnl|Hg17|chr1 (79068323-79067595)
               

               
               15-708, gnl|Mm7|chr3 (151444025-151444702)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-708, gnl|bosTau2|chr3 (43882545-43883231)
               

               
               15-708, gnl|Hg17|chr1 (79068323-79067595)
               

               
               15-708, gnl|Mm7|chr3 (151444025-151444702)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               kid (0.129735)
               

               
               ret (0.128733)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)
               

               
               ret (0.128733)
               

               
               tra (0.123092)

	15-708, gnl\|bosTau2\|chr3 (43882545-43883231)
	15-708, gnl\|Hg17\|chr1 (79068323-79067595)
	15-708, gnl\|Mm7\|chr3 (151444025-151444702)