Non-Coding RNA Search

Ss1.1-Pig1-94A06.5

Sequence:


               
               GCTTATCAAAAGTATCCAGCGAGAATGAGGACGCAGCATTGTGTATCAGAACTGGAAAGT
CACTCAGTAGAGAAATCATTTCATGGACACAACCAGAACCTGTGTAATGTTAATGAAAAT
TATATCTAACAACCAGATTTAGTTCGCTTTCAGACAGGGAACCAGGAGAAAATAAATTTT
CACTCGTGTTTTTAGTCTACTGACTCCTAAAGATTCTTTTTCCTTAAAAGTTAAAAAGTC
TTTTGTGATGGAATCATATTTATTGAGCATTTATTATGTACCAGACACTGTTCTTAATGT
GAAAATGCTGCATCAAACAAAACAATGCCTGTCTTTTATCAAGTATACTTTCTAAAAAGA
AGACAATCTAAACAAGTAAATGAGTATAATTTCAAATGGTGCTATGTTCTGTGGGGAGAA
AAACCCCAAAAGCAAACAGAGTAAGGCGAGAAGGATAGTGACTTGGGCATGAGGAGGTAT
TTCAGGTGGGCTGGGCAGAAGTGGCATTTAAGCGCAGATCTAAATGTTGAGAAGGAGTGG
ACCATGAGCATACCAGGCAGAGGGAAGAGCTAGTATAAAGGCCTTCAGACAGGAACAAGA
TCAGCTCATTTTTAATAAGAGCTAGAACTGCTGTGTGACCACAGTGTTTGAGTATGGAGA
GCCTGGTAAAGATGATGCCAGAAAATTAGGCCAGGGCCAAATTGTGTTGGCACTGTGTAG
GCTAAAAGGGTTCTGGATTTTTTATTGTGAGTGTGATAGGAAGTCACCGGAAGGTTTTGA
CATCTGAATGGGATTTTGTTTAAAGATGATTTTGGCTACTATGTGGAAAAAAGGCAGTAG
AGAGCAAGAATCAAAGAAAAGAAATCATGCTAAGTGAACTCAGTCAGATAATGAGACACC
AACATCAAATGCTATCACTTACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTATCAAAAGTATCCAGCGAGAATGAGGACGCAGCATTGTGTATCAGAACTGGAAAGT
CACTCAGTAGAGAAATCATTTCATGGACACAACCAGAACCTGTGTAATGTTAATGAAAAT
TATATCTAACAACCAGATTTAGTTCGCTTTCAGACAGGGAACCAGGAGAAAATAAATTTT
CACTCGTGTTTTTAGTCTACTGACTCCTAAAGATTCTTTTTCCTTAAAAGTTAAAAAGTC
TTTTGTGATGGAATCATATTTATTGAGCATTTATTATGTACCAGACACTGTTCTTAATGT
GAAAATGCTGCATCAAACAAAACAATGCCTGTCTTTTATCAAGTATACTTTCTAAAAAGA
AGACAATCTAAACAAGTAAATGAGTATAATTTCAAATGGTGCTATGTTCTGTGGGGAGAA
AAACCCCAAAAGCAAACAGAGTAAGGCGAGAAGGATAGTGACTTGGGCATGAGGAGGTAT
TTCAGGTGGGCTGGGCAGAAGTGGCATTTAAGCGCAGATCTAAATGTTGAGAAGGAGTGG
ACCATGAGCATACCAGGCAGAGGGAAGAGCTAGTATAAAGGCCTTCAGACAGGAACAAGA
TCAGCTCATTTTTAATAAGAGCTAGAACTGCTGTGTGACCACAGTGTTTGAGTATGGAGA
GCCTGGTAAAGATGATGCCAGAAAATTAGGCCAGGGCCAAATTGTGTTGGCACTGTGTAG
GCTAAAAGGGTTCTGGATTTTTTATTGTGAGTGTGATAGGAAGTCACCGGAAGGTTTTGA
CATCTGAATGGGATTTTGTTTAAAGATGATTTTGGCTACTATGTGGAAAAAAGGCAGTAG
AGAGCAAGAATCAAAGAAAAGAAATCATGCTAAGTGAACTCAGTCAGATAATGAGACACC
AACATCAAATGCTATCACTTACAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               52-471, gnl|bosTau2|chr15 (47161140-47160731)
               

               
               52-471, gnl|Hg17|chr11 (44229695-44230116)
               

               
               52-471, gnl|Mm7|chr2 (93540463-93540065)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-471, gnl|bosTau2|chr15 (47161140-47160731)
               

               
               52-471, gnl|Hg17|chr11 (44229695-44230116)
               

               
               52-471, gnl|Mm7|chr2 (93540463-93540065)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jej (0.0989218)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.0989218)

	52-471, gnl\|bosTau2\|chr15 (47161140-47160731)
	52-471, gnl\|Hg17\|chr11 (44229695-44230116)
	52-471, gnl\|Mm7\|chr2 (93540463-93540065)