Non-Coding RNA Search

Ss1.1-Pig1-95B03.5

Sequence:


               
               GCGGCCGCCGGTGTCCGAGGACTCTCTGGGCGCGCATGGTGAGGCGGTGTGGCTGCAGCT
GCAGGGCGAGGAACTGCGGCTGCAGGAGGAGAGCCTACGGCTGCACCAGATCAACATCTA
CCTCAGCGACCGCATCTCGCTGCACCGTCGCCTGCCAGAGCGCTGGAACCCGCTGTGCAA
AGAGAAGAAATACGATTATGACCATTTGCCCACAACATCGGTCGTCATTGCATTTTATAA
TGAAGCCTGGTCAACGCTCCTTCGGACGGTTTACAGTGTCCTTGAGACGTCCCCTGACAT
CCTGCTGGAAGAAGTTATCCTTGTAGATGACTACAGCGATCGAGAGCACCTGAAGGAGCG
CCTGGCTATTGAGCTTGCCAAGCTGCCCAAGGTCCGCCTGATCCGCGCCAACAAGAGGGA
GGGCCTGGTGCGAGCACGGCTGCTGGGGGCTTCCGTGGCCAAGGGTGATGTGCTGACCTT
CCTGGACTGCCACTGCGAGTGCCACGAGGGCTGGCTGGAGCCGCTGCTGCAGAGGATTCA
CGAAAAAGAGTCGGCAGTGGTGTGCCCTGTGATTGACGTGATTGACTGGAATACCTTCGA
GTACATGGGGAACTCCAGGGAGCCCCAGATCGGCGGGTTTGACTGGAGGCTCGTGTTCAC
ATGGCACGTGGTTCCCGAGAGGGAGAGGCTCCGCATGAAGTCCCCCATCGATGTCATCAG
GTCTCCAACCATGGCTGGTGGGCTGTTTGCCGTGAGTAAGAAATATTTTGAATACCTGGG
GGCTTATGATACAGGAATGGAAGTTTGGGGAGGAGAGAACCTCGAGTTTTCCTTTAGGAT
CTGGCAATGCGGGGGGACCCTGGAGATACACCCGTGTTCCCATGTTGGCCATGTTTTCCC
CAAGCAAGCTCCTTACTCCCGTAGCAAAGCTCTGGCCAACAGTGTCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCGCCGGTGTCCGAGGACTCTCTGGGCGCGCATGGTGAGGCGGTGTGGCTGCAGCT
GCAGGGCGAGGAACTGCGGCTGCAGGAGGAGAGCCTACGGCTGCACCAGATCAACATCTA
CCTCAGCGACCGCATCTCGCTGCACCGTCGCCTGCCAGAGCGCTGGAACCCGCTGTGCAA
AGAGAAGAAATACGATTATGACCATTTGCCCACAACATCGGTCGTCATTGCATTTTATAA
TGAAGCCTGGTCAACGCTCCTTCGGACGGTTTACAGTGTCCTTGAGACGTCCCCTGACAT
CCTGCTGGAAGAAGTTATCCTTGTAGATGACTACAGCGATCGAGAGCACCTGAAGGAGCG
CCTGGCTATTGAGCTTGCCAAGCTGCCCAAGGTCCGCCTGATCCGCGCCAACAAGAGGGA
GGGCCTGGTGCGAGCACGGCTGCTGGGGGCTTCCGTGGCCAAGGGTGATGTGCTGACCTT
CCTGGACTGCCACTGCGAGTGCCACGAGGGCTGGCTGGAGCCGCTGCTGCAGAGGATTCA
CGAAAAAGAGTCGGCAGTGGTGTGCCCTGTGATTGACGTGATTGACTGGAATACCTTCGA
GTACATGGGGAACTCCAGGGAGCCCCAGATCGGCGGGTTTGACTGGAGGCTCGTGTTCAC
ATGGCACGTGGTTCCCGAGAGGGAGAGGCTCCGCATGAAGTCCCCCATCGATGTCATCAG
GTCTCCAACCATGGCTGGTGGGCTGTTTGCCGTGAGTAAGAAATATTTTGAATACCTGGG
GGCTTATGATACAGGAATGGAAGTTTGGGGAGGAGAGAACCTCGAGTTTTCCTTTAGGAT
CTGGCAATGCGGGGGGACCCTGGAGATACACCCGTGTTCCCATGTTGGCCATGTTTTCCC
CAAGCAAGCTCCTTACTCCCGTAGCAAAGCTCTGGCCAACAGTGTCCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55957354|emb|CAI17042.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55957354|emb|CAI17042.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               209-897, gnl|bosTau2|chr10 (16594302-16594991)
               

               
               209-897, gnl|Hg17|chr18 (31511584-31525032)
               

               
               209-897, gnl|Mm7|chr14 (106985050-106984329)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               209-897, gnl|bosTau2|chr10 (16594302-16594991)
               

               
               209-897, gnl|Hg17|chr18 (31511584-31525032)
               

               
               209-897, gnl|Mm7|chr14 (106985050-106984329)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	209-897, gnl\|bosTau2\|chr10 (16594302-16594991)
	209-897, gnl\|Hg17\|chr18 (31511584-31525032)
	209-897, gnl\|Mm7\|chr14 (106985050-106984329)