Ss1.1-Pig1-95K18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGAAGCTGGAGAGTGACCCCATCTGCCAACGCCTTTCCCTCAAGTCCTTCCTGATTCT GCCCTTCCAGCGTATCACCCGTCTCAAACTACTGCTGCAGAACATTCTAAAGAGAACACA GCCCGGGTCCTCAGAGGAAGCAGAGGCCACGAAGGCACACCACGCCTTGGAGGAGCTGAT CCGAGACTGCAATAACAATGTCCAGAGAATGCGGCGGACAGAGGAGCTCATCTACCTGAG CCAGAAGATTGAGTTTGAGTGCAAAATATTTCCACTCATTTCACAGTCACGCTGGCTGGT GAAGAGTGGAGAGCTGATGGCCCTGGAGTTCAGCATCTCCCCAGGGCTGCGGAGGAAACT GAACACGCGGCCAGTCCACCTGCATCTCTTCAATGACTGTCTGTTGCTGTCTCGGCCCCG AGAGGGCAGCCGATTCCTGGTATTTGACCATGCTCCCTTCTCCTCTGTTCGAGGGGAGAA GTGTGAAATGAAGCTACACGGACCTCACAAAAACCTCTTCCGGCTCTTCCTGAGGCAAAA TGCACAGGGCACCCAGGCCGAATTCCTCTTCCGCACTGAGACTCAAAGTGAAAAGCTTCG ATGGATCTCAGCCTTGTCCATGCCAAGGGAGGAGTTGGACCTTCTGGAGTGTTACGATTC CCCACAAGTTCAGTGCCTTCGAGCCTACAAACCCCGAGAGAATGATGAGTTGGCGCTAGA GAAGGCGGACGTGGTGATGGTGACCCAGCAAAGCAGTGATGGCTGGCTGGAAGGTGTGAG ACTTTCAGATGGGGAGCAAGGCTGGTTCCCCCTCCAGCAAGTGGAGTTCATTTCCAACCC AGATGTCCGTGCACGGAACCTGAAGGAAGCCCACCGAGTCAAGACTGCCAAACTACAGCT GGTGGAACAGCAGACCTAGCTTCTTTCCAGGAGGAATCCCCTGAGATTAAAGGCAAGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGAAGCTGGAGAGTGACCCCATCTGCCAACGCCTTTCCCTCAAGTCCTTCCTGATTCT GCCCTTCCAGCGTATCACCCGTCTCAAACTACTGCTGCAGAACATTCTAAAGAGAACACA GCCCGGGTCCTCAGAGGAAGCAGAGGCCACGAAGGCACACCACGCCTTGGAGGAGCTGAT CCGAGACTGCAATAACAATGTCCAGAGAATGCGGCGGACAGAGGAGCTCATCTACCTGAG CCAGAAGATTGAGTTTGAGTGCAAAATATTTCCACTCATTTCACAGTCACGCTGGCTGGT GAAGAGTGGAGAGCTGATGGCCCTGGAGTTCAGCATCTCCCCAGGGCTGCGGAGGAAACT GAACACGCGGCCAGTCCACCTGCATCTCTTCAATGACTGTCTGTTGCTGTCTCGGCCCCG AGAGGGCAGCCGATTCCTGGTATTTGACCATGCTCCCTTCTCCTCTGTTCGAGGGGAGAA GTGTGAAATGAAGCTACACGGACCTCACAAAAACCTCTTCCGGCTCTTCCTGAGGCAAAA TGCACAGGGCACCCAGGCCGAATTCCTCTTCCGCACTGAGACTCAAAGTGAAAAGCTTCG ATGGATCTCAGCCTTGTCCATGCCAAGGGAGGAGTTGGACCTTCTGGAGTGTTACGATTC CCCACAAGTTCAGTGCCTTCGAGCCTACAAACCCCGAGAGAATGATGAGTTGGCGCTAGA GAAGGCGGACGTGGTGATGGTGACCCAGCAAAGCAGTGATGGCTGGCTGGAAGGTGTGAG ACTTTCAGATGGGGAGCAAGGCTGGTTCCCCCTCCAGCAAGTGGAGTTCATTTCCAACCC AGATGTCCGTGCACGGAACCTGAAGGAAGCCCACCGAGTCAAGACTGCCAAACTACAGCT GGTGGAACAGCAGACCTAGCTTCTTTCCAGGAGGAATCCCCTGAGATTAAAGGCAAGATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 266-424, gnl|bosTau2|chr4 (61632710-61632868) | |
| 266-424, gnl|canFam2|chr16 (8635825-8636021) | |
| 266-424, gnl|danRer3|chr23 (33148212-33148399) | |
| 266-424, gnl|dasNov1|scaffold_75656 (4261-4064) | |
| 266-424, gnl|echTel1|scaffold_301526 (4830-5019) | |
| 266-424, gnl|fr1|chrUn (185424857-185425027) | |
| 266-424, gnl|galGal2|chr1 (185118661-185118849) | |
| 266-424, gnl|hg17|chr7 (143409477-143409674) | |
| 266-424, gnl|Hg17|chr7 (143509473-143509631) | |
| 266-424, gnl|mm7|chr6 (43324876-43324681) | |
| 266-424, gnl|Mm7|chr6 (43324707-43324865) | |
| 266-424, gnl|monDom2|scaffold_7 (2888078-2887881) | |
| 266-424, gnl|oryCun1|scaffold_137185 (4761-4565) | |
| 266-424, gnl|panTro1|chr6 (146119334-146119137) | |
| 266-424, gnl|rheMac2|chr3 (181691071-181690874) | |
| 266-424, gnl|rn3|chr4 (71323697-71323502) | |
| 266-424, gnl|tetNig1|chrUn_random (28328208-28328378) | |
| 266-424, gnl|xenTro1|scaffold_510 (331521-331333) | |
| 761-960, gnl|bosTau2|chr4 (61637825-61638024) | |
| 761-960, gnl|Hg17|chr7 (143514639-143514838) | |
| 761-960, gnl|Mm7|chr6 (43330146-43330344) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 266-424, gnl|bosTau2|chr4 (61632710-61632868) | |
| 266-424, gnl|canFam2|chr16 (8635825-8636021) | |
| 266-424, gnl|danRer3|chr23 (33148212-33148399) | |
| 266-424, gnl|dasNov1|scaffold_75656 (4261-4064) | |
| 266-424, gnl|echTel1|scaffold_301526 (4830-5019) | |
| 266-424, gnl|fr1|chrUn (185424857-185425027) | |
| 266-424, gnl|galGal2|chr1 (185118661-185118849) | |
| 266-424, gnl|hg17|chr7 (143409477-143409674) | |
| 266-424, gnl|Hg17|chr7 (143509473-143509631) | |
| 266-424, gnl|mm7|chr6 (43324876-43324681) | |
| 266-424, gnl|Mm7|chr6 (43324707-43324865) | |
| 266-424, gnl|monDom2|scaffold_7 (2888078-2887881) | |
| 266-424, gnl|oryCun1|scaffold_137185 (4761-4565) | |
| 266-424, gnl|panTro1|chr6 (146119334-146119137) | |
| 266-424, gnl|rheMac2|chr3 (181691071-181690874) | |
| 266-424, gnl|rn3|chr4 (71323697-71323502) | |
| 266-424, gnl|tetNig1|chrUn_random (28328208-28328378) | |
| 266-424, gnl|xenTro1|scaffold_510 (331521-331333) | |
| 761-960, gnl|bosTau2|chr4 (61637825-61638024) | |
| 761-960, gnl|Hg17|chr7 (143514639-143514838) | |
| 761-960, gnl|Mm7|chr6 (43330146-43330344) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) | |
| eep (0.122564) | |
| cty (0.10408) |