Non-Coding RNA Search

Ss1.1-Pig1-95O07.5

Sequence:


               
               GGCACGGAAGGGTCCCAGAACCAGGCCTGGAGGTGGTGGGGGCCGGATGCCCCCCAGCCA
TTCCTCAGGGCCCCGCCCAGGCCTTGGCCTCTGGACGGGTCAGTCCCAACCCAAGTCCGG
GCTCCTCCCTTCACCCGCCATTGCCGCTCGGCCGTGGCCTTGGCCTTGGCCTGTGCAAAT
CACTGTTCACAAATGTGTAAGATTTTCCAGGCCAGTTCGTTATGGGAGACGAATTTCAGG
ACATGAACATGAGTCTTTTTGCACCATTTATTTTTTGAATTCTCCCTCTTCGTGGAAAAA
TAGCTGCAAGTGTAAAAGTGAGTCAGCCCTGAGTCTTATGAGACCTGCAAGGTGCGGACG
GTGAAGGCAGGTACCCTGGAGAAGCTGGTGGGGCACCTGGTGCCCGCCTTCCAGGGCAGC
GACCTCTCCTACGTCACCGTCTTCCTGTGCACCTACCGGGCCTTCACCACCACCCAGCAA
GTCCTGGACCTGCTGTTCGAAAGATACGGCTGCATCCTGCCTTATGCCCACGAGGACGGC
GGGCCCCAGGACCAGCTGAAAAATGCCATCTCCTCCATCCTGGGCACCTGGCTGGACCAG
TACTCGGAGGACTTCGTCAGCCCTGCGACTTTCCCTGCCTCAAGCAGCTGGTGGCCTATG
TGCAGCTCAACATGCCCGGCTCCGACCTGGAGCGCCGTGCCCACCTTCTCCTGGCCCAGC
TGGAGCACGCGGAGCTCACCCAGGCAGAGCCGGAGGGGGAGGCTGCTGGGATCCGAGGAG
CCAGGTGCCCCTGCAGAAACAGCGCACAAGTAAAGGCAGCCCAGAGCCTGAGGAAGGTCC
ACCCTCAGCTACAGCGCCACCTCCACGGCGACTCCAGAATTGCAGCCAACAGCGCAGTCA
GTTCCATTAGCAGCTCCTGAGTGAGCAGCCCCCAAGGGAGACCTGGAGCCATCTCAGGAC
CCAGCACCCCTGCAGGGAAGGCAGCTCTCGAACCTTCCACCCTTTCCACGACCAGAACTT
TTCTTCCTCTCCCCTGTGACTGTGTCTATTGAGGGCTCTTTTTTTTTTTTTCACTTTACT
TTTTTATATTTGAGGCTTTAAAATTCAAATCGAATAAAATGTAAGCAGCTCGTCATTTTC
AAATGTGCAGTTCACGAGCCTGTCCTACATTCACAATGTCGCACAAAAACGATCACTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCACGGAAGGGTCCCAGAACCAGGCCTGGAGGTGGTGGGGGCCGGATGCCCCCCAGCCA
TTCCTCAGGGCCCCGCCCAGGCCTTGGCCTCTGGACGGGTCAGTCCCAACCCAAGTCCGG
GCTCCTCCCTTCACCCGCCATTGCCGCTCGGCCGTGGCCTTGGCCTTGGCCTGTGCAAAT
CACTGTTCACAAATGTGTAAGATTTTCCAGGCCAGTTCGTTATGGGAGACGAATTTCAGG
ACATGAACATGAGTCTTTTTGCACCATTTATTTTTTGAATTCTCCCTCTTCGTGGAAAAA
TAGCTGCAAGTGTAAAAGTGAGTCAGCCCTGAGTCTTATGAGACCTGCAAGGTGCGGACG
GTGAAGGCAGGTACCCTGGAGAAGCTGGTGGGGCACCTGGTGCCCGCCTTCCAGGGCAGC
GACCTCTCCTACGTCACCGTCTTCCTGTGCACCTACCGGGCCTTCACCACCACCCAGCAA
GTCCTGGACCTGCTGTTCGAAAGATACGGCTGCATCCTGCCTTATGCCCACGAGGACGGC
GGGCCCCAGGACCAGCTGAAAAATGCCATCTCCTCCATCCTGGGCACCTGGCTGGACCAG
TACTCGGAGGACTTCGTCAGCCCTGCGACTTTCCCTGCCTCAAGCAGCTGGTGGCCTATG
TGCAGCTCAACATGCCCGGCTCCGACCTGGAGCGCCGTGCCCACCTTCTCCTGGCCCAGC
TGGAGCACGCGGAGCTCACCCAGGCAGAGCCGGAGGGGGAGGCTGCTGGGATCCGAGGAG
CCAGGTGCCCCTGCAGAAACAGCGCACAAGTAAAGGCAGCCCAGAGCCTGAGGAAGGTCC
ACCCTCAGCTACAGCGCCACCTCCACGGCGACTCCAGAATTGCAGCCAACAGCGCAGTCA
GTTCCATTAGCAGCTCCTGAGTGAGCAGCCCCCAAGGGAGACCTGGAGCCATCTCAGGAC
CCAGCACCCCTGCAGGGAAGGCAGCTCTCGAACCTTCCACCCTTTCCACGACCAGAACTT
TTCTTCCTCTCCCCTGTGACTGTGTCTATTGAGGGCTCTTTTTTTTTTTTTCACTTTACT
TTTTTATATTTGAGGCTTTAAAATTCAAATCGAATAAAATGTAAGCAGCTCGTCATTTTC
AAATGTGCAGTTCACGAGCCTGTCCTACATTCACAATGTCGCACAAAAACGATCACTGCT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               46-503, gnl|bosTau2|chr11 (85640040-85639578)
               


               
               564-770, gnl|bosTau2|chr11 (85638753-85638544)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-503, gnl|bosTau2|chr11 (85640040-85639578)
               


               
               564-770, gnl|bosTau2|chr11 (85638753-85638544)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	46-503, gnl\|bosTau2\|chr11 (85640040-85639578)

	564-770, gnl\|bosTau2\|chr11 (85638753-85638544)