Non-Coding RNA Search

Ss1.1-Pig1-98P24.5

Sequence:


               
               TGAACTTGTTCAGGCGTTCCGAGCAGCCGTGTCCACCACCCAAGGACCCAGGAAGGTGCT
GAAGCCAGCAAATTCCAGGTCACGGACAGTGCTGTGTTCAATGCTTTGGTCACCTTCTGC
ATGAGATATCTCTTTGGCTGCCTCGAGAAACTGCTGTTTGGAAAAGCCCCAAAGGATAGC
AGCAGGGTGCTGCAGCCATCCAACAGCCCGCTGTGGGGGAAGCTCCGGCTGGACGTAAAG
GCGTACCTGAGTGCTGTCATACAGCTGGTGGCCTGTGTGGCAGAGGCGACAGTAGCGGCG
GCCGTCCTCCAGCACGTGGGCAGCTCTGTGCTCTACTACCTCACCTTCCCCAAGCAGTGC
CGCATGCTGCTCAAGAGAATGGTGGCCCTGTGGAGCACGGGAGAGGAGACGGTGCGAGTG
CTGGCCTTCCTGGTCCTGGGCAGGGTCTGCCGACACAAGAAGGACGTCTTCCTGAGCCCT
GTTCTCAAGCAAATGTACATCACGTACGTGAGGAACTGCAAATTCACCTCCCCCAGCGCA
CTGCCCCTCATCAGCTTCATGCAGCGGACCCTGACGGAGCTGCTGGCCCTGGACTCTGGC
GTCGCCTACCAGCATGCCTTCCTCTACATCCGCCAGCTCGCTATCCACCTGCGCAATGCC
ATGACCACACGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAACTTGTTCAGGCGTTCCGAGCAGCCGTGTCCACCACCCAAGGACCCAGGAAGGTGCT
GAAGCCAGCAAATTCCAGGTCACGGACAGTGCTGTGTTCAATGCTTTGGTCACCTTCTGC
ATGAGATATCTCTTTGGCTGCCTCGAGAAACTGCTGTTTGGAAAAGCCCCAAAGGATAGC
AGCAGGGTGCTGCAGCCATCCAACAGCCCGCTGTGGGGGAAGCTCCGGCTGGACGTAAAG
GCGTACCTGAGTGCTGTCATACAGCTGGTGGCCTGTGTGGCAGAGGCGACAGTAGCGGCG
GCCGTCCTCCAGCACGTGGGCAGCTCTGTGCTCTACTACCTCACCTTCCCCAAGCAGTGC
CGCATGCTGCTCAAGAGAATGGTGGCCCTGTGGAGCACGGGAGAGGAGACGGTGCGAGTG
CTGGCCTTCCTGGTCCTGGGCAGGGTCTGCCGACACAAGAAGGACGTCTTCCTGAGCCCT
GTTCTCAAGCAAATGTACATCACGTACGTGAGGAACTGCAAATTCACCTCCCCCAGCGCA
CTGCCCCTCATCAGCTTCATGCAGCGGACCCTGACGGAGCTGCTGGCCCTGGACTCTGGC
GTCGCCTACCAGCATGCCTTCCTCTACATCCGCCAGCTCGCTATCCACCTGCGCAATGCC
ATGACCACACGC

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               262-375, gnl|bosTau2|chr16 (41334425-41334538)
               

               
               262-375, gnl|Hg17|chr1 (929418-929305)
               


               
               458-672, gnl|bosTau2|chr16 (41335349-41335563)
               

               
               458-672, gnl|Hg17|chr1 (928154-927941)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               262-375, gnl|bosTau2|chr16 (41334425-41334538)
               

               
               262-375, gnl|Hg17|chr1 (929418-929305)
               


               
               458-672, gnl|bosTau2|chr16 (41335349-41335563)
               

               
               458-672, gnl|Hg17|chr1 (928154-927941)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	262-375, gnl\|bosTau2\|chr16 (41334425-41334538)
	262-375, gnl\|Hg17\|chr1 (929418-929305)

	458-672, gnl\|bosTau2\|chr16 (41335349-41335563)
	458-672, gnl\|Hg17\|chr1 (928154-927941)