Ss1.1-Pig1-99G18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAAGGATGGCTCTATTTTAACTATAAGTGCCTTTTGATGAAAATCCCCAAAGTCCCAGG CGATTGGAAAAACTGGACATCTGCTCAAAATTTCTGTGTTAAAGAAGGGGGGACACTGGT CGCCATTGAAAATGAAGTGGAACAAGCTTTCATTACTATGAATCTTTTTGGCCAGACCAC TAATGTGTGGATAGGGTTACAAAATGGTGATTATGAAAAATGGCTAAATGGAAGGCCTGT GTCATATTCTAATTGGTCTCCATTTGATATAGTAAATCTTCCAAGTCATAACCCCACCAA AGTTCAAAAACACATTCCTCTCTGTGCCTTGCTGTCGAATAATCCTAATTTTCACTTCAC TGGAAAATGGTATTTTGAAGACTGTAGAGAAGAAGGTTATGGATTTATTTGTGAAAAAAT GCAGGGTCTGTGGGATTCTAAGGACTCCAGAGACCACCTGAAGGATGACCAAGTTTATGC ATCCATTTTGGTCATGTTAAAAGCCTTTACTGCTTGTTCTAGGATTGTATGTCTGTTCAG ATAATAAAAAAGACATCGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAAGGATGGCTCTATTTTAACTATAAGTGCCTTTTGATGAAAATCCCCAAAGTCCCAGG CGATTGGAAAAACTGGACATCTGCTCAAAATTTCTGTGTTAAAGAAGGGGGGACACTGGT CGCCATTGAAAATGAAGTGGAACAAGCTTTCATTACTATGAATCTTTTTGGCCAGACCAC TAATGTGTGGATAGGGTTACAAAATGGTGATTATGAAAAATGGCTAAATGGAAGGCCTGT GTCATATTCTAATTGGTCTCCATTTGATATAGTAAATCTTCCAAGTCATAACCCCACCAA AGTTCAAAAACACATTCCTCTCTGTGCCTTGCTGTCGAATAATCCTAATTTTCACTTCAC TGGAAAATGGTATTTTGAAGACTGTAGAGAAGAAGGTTATGGATTTATTTGTGAAAAAAT GCAGGGTCTGTGGGATTCTAAGGACTCCAGAGACCACCTGAAGGATGACCAAGTTTATGC ATCCATTTTGGTCATGTTAAAAGCCTTTACTGCTTGTTCTAGGATTGTATGTCTGTTCAG ATAATAAAAAAGACATCGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAA |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 145-277, gnl|bosTau2|chr2 (26002580-26002448) | |
| 145-277, gnl|canFam2|chr36 (8716645-8716799) | |
| 145-277, gnl|dasNov1|scaffold_55633 (5305-5459) | |
| 145-277, gnl|echTel1|scaffold_310481 (10658-10812) | |
| 145-277, gnl|fr1|chrUn (130391211-130391069) | |
| 145-277, gnl|galGal2|chr7 (22701257-22701105) | |
| 145-277, gnl|hg17|chr2 (160637706-160637860) | |
| 145-277, gnl|Hg17|chr2 (160637848-160637716) | |
| 145-277, gnl|loxAfr1|scaffold_29624 (14918-14764) | |
| 145-277, gnl|mm7|chr2 (60363083-60363237) | |
| 145-277, gnl|Mm7|chr2 (60363225-60363093) | |
| 145-277, gnl|monDom2|scaffold_2 (54039844-54039999) | |
| 145-277, gnl|oryCun1|scaffold_205254 (147416-147262) | |
| 145-277, gnl|panTro1|chr13 (50013376-50013530) | |
| 145-277, gnl|rheMac2|chr12 (23498626-23498780) | |
| 145-277, gnl|rn3|chr3 (42031049-42031203) | |
| 145-277, gnl|xenTro1|scaffold_311 (817024-816870) | |
| 279-427, gnl|bosTau2|chr2 (26002114-26001969) | |
| 279-427, gnl|canFam2|chr36 (8716128-8716251) | |
| 279-427, gnl|dasNov1|scaffold_55633 (4796-4914) | |
| 279-427, gnl|echTel1|scaffold_310481 (10173-10290) | |
| 279-427, gnl|fr1|chrUn (130391638-130391515) | |
| 279-427, gnl|galGal2|chr7 (22701976-22701854) | |
| 279-427, gnl|hg17|chr2 (160637197-160637320) | |
| 279-427, gnl|Hg17|chr2 (160637363-160637215) | |
| 279-427, gnl|loxAfr1|scaffold_29624 (15402-15284) | |
| 279-427, gnl|mm7|chr2 (60362483-60362606) | |
| 279-427, gnl|Mm7|chr2 (60362649-60362501) | |
| 279-427, gnl|monDom2|scaffold_2 (54039331-54039449) | |
| 279-427, gnl|oryCun1|scaffold_205254 (147931-147808) | |
| 279-427, gnl|panTro1|chr13 (50012869-50012992) | |
| 279-427, gnl|rheMac2|chr12 (23498107-23498230) | |
| 279-427, gnl|rn3|chr3 (42030454-42030577) | |
| 279-427, gnl|tetNig1|chr5 (9383892-9384015) | |
| 279-427, gnl|xenTro1|scaffold_311 (818574-818479) | |
| 430-561, gnl|bosTau2|chr2 (26001795-26001667) | |
| 430-561, gnl|Hg17|chr2 (160637030-160636896) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 145-277, gnl|bosTau2|chr2 (26002580-26002448) | |
| 145-277, gnl|canFam2|chr36 (8716645-8716799) | |
| 145-277, gnl|dasNov1|scaffold_55633 (5305-5459) | |
| 145-277, gnl|echTel1|scaffold_310481 (10658-10812) | |
| 145-277, gnl|fr1|chrUn (130391211-130391069) | |
| 145-277, gnl|galGal2|chr7 (22701257-22701105) | |
| 145-277, gnl|hg17|chr2 (160637706-160637860) | |
| 145-277, gnl|Hg17|chr2 (160637848-160637716) | |
| 145-277, gnl|loxAfr1|scaffold_29624 (14918-14764) | |
| 145-277, gnl|mm7|chr2 (60363083-60363237) | |
| 145-277, gnl|Mm7|chr2 (60363225-60363093) | |
| 145-277, gnl|monDom2|scaffold_2 (54039844-54039999) | |
| 145-277, gnl|oryCun1|scaffold_205254 (147416-147262) | |
| 145-277, gnl|panTro1|chr13 (50013376-50013530) | |
| 145-277, gnl|rheMac2|chr12 (23498626-23498780) | |
| 145-277, gnl|rn3|chr3 (42031049-42031203) | |
| 145-277, gnl|xenTro1|scaffold_311 (817024-816870) | |
| 279-427, gnl|bosTau2|chr2 (26002114-26001969) | |
| 279-427, gnl|canFam2|chr36 (8716128-8716251) | |
| 279-427, gnl|dasNov1|scaffold_55633 (4796-4914) | |
| 279-427, gnl|echTel1|scaffold_310481 (10173-10290) | |
| 279-427, gnl|fr1|chrUn (130391638-130391515) | |
| 279-427, gnl|galGal2|chr7 (22701976-22701854) | |
| 279-427, gnl|hg17|chr2 (160637197-160637320) | |
| 279-427, gnl|Hg17|chr2 (160637363-160637215) | |
| 279-427, gnl|loxAfr1|scaffold_29624 (15402-15284) | |
| 279-427, gnl|mm7|chr2 (60362483-60362606) | |
| 279-427, gnl|Mm7|chr2 (60362649-60362501) | |
| 279-427, gnl|monDom2|scaffold_2 (54039331-54039449) | |
| 279-427, gnl|oryCun1|scaffold_205254 (147931-147808) | |
| 279-427, gnl|panTro1|chr13 (50012869-50012992) | |
| 279-427, gnl|rheMac2|chr12 (23498107-23498230) | |
| 279-427, gnl|rn3|chr3 (42030454-42030577) | |
| 279-427, gnl|tetNig1|chr5 (9383892-9384015) | |
| 279-427, gnl|xenTro1|scaffold_311 (818574-818479) | |
| 430-561, gnl|bosTau2|chr2 (26001795-26001667) | |
| 430-561, gnl|Hg17|chr2 (160637030-160636896) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |