Ss1.1-Pig2-100L05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCAGCAGAACAAGGCGCTGGCTGCCGAGCTGAACCAGCTGCGGGCCAAGGAGCCCACC AAGCTGGCCGACGTCTACCAGGCCGAGCTGCGAGAGCTGCGGCTGCGGCTCGACCAACTC ACCGCCAACGGCGCCCGGCTCGAGGTGGAGAGGGACAACCTGGCGCAGGACCTGGGCACC CTGAGGCAGAAGCTCCAGGATGAAACCAACCTGAGGCTGGAGGCTGAGAACAACCTGGCC ACCTATCGACAGGAGGCGGATGAAGCCACCCTGGCCCGGCTGGATCTGGAGAGGAAGATC GAGTCTTTGGAGGAGGAAATCAGGTTCTTGAGGAAGATCCATGACGAGGAGGTGCGGGAA CTCCAGGAGCAGCTGGCACAGCAGCAGGTCCACGTGGAAATGGACGTGACCAAGCCCGAC CTCACAGCGGCCCTGAGAGAGATTCGCACGCAATATGAGGCTGTGGCAACCAGCAACATG CAGGAGGCAGAGGAGTGGTACCGGTCCAAGTTTGCGGACCTAACAGACGCCGCGGCCCGC AACGCGGAGCTGCTCCGCCAGGCCAAGCACGAGGCCAACGACTACCGGCGCCAGCTGCAG GCCTTGACCTGCGACGTGGAGTCCCTGCGCGGCACGAACGAGTCCCTGGAGAGGCAGATG CGGGAGCAGGAGGAGCGCCACGCGCGGGAGGCAGCGAGTTACCAGGAGGCGCTGACCCGG CTGGAGGAGGAGGGGCAGAGCCTCAAGGACGAGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCAGCAGAACAAGGCGCTGGCTGCCGAGCTGAACCAGCTGCGGGCCAAGGAGCCCACC AAGCTGGCCGACGTCTACCAGGCCGAGCTGCGAGAGCTGCGGCTGCGGCTCGACCAACTC ACCGCCAACGGCGCCCGGCTCGAGGTGGAGAGGGACAACCTGGCGCAGGACCTGGGCACC CTGAGGCAGAAGCTCCAGGATGAAACCAACCTGAGGCTGGAGGCTGAGAACAACCTGGCC ACCTATCGACAGGAGGCGGATGAAGCCACCCTGGCCCGGCTGGATCTGGAGAGGAAGATC GAGTCTTTGGAGGAGGAAATCAGGTTCTTGAGGAAGATCCATGACGAGGAGGTGCGGGAA CTCCAGGAGCAGCTGGCACAGCAGCAGGTCCACGTGGAAATGGACGTGACCAAGCCCGAC CTCACAGCGGCCCTGAGAGAGATTCGCACGCAATATGAGGCTGTGGCAACCAGCAACATG CAGGAGGCAGAGGAGTGGTACCGGTCCAAGTTTGCGGACCTAACAGACGCCGCGGCCCGC AACGCGGAGCTGCTCCGCCAGGCCAAGCACGAGGCCAACGACTACCGGCGCCAGCTGCAG GCCTTGACCTGCGACGTGGAGTCCCTGCGCGGCACGAACGAGTCCCTGGAGAGGCAGATG CGGGAGCAGGAGGAGCGCCACGCGCGGGAGGCAGCGAGTTACCAGGAGGCGCTGACCCGG CTGGAGGAGGAGGGGCAGAGCCTCAAGGACGAGATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 1-192, gnl|bosTau2|chr13 (19897309-19897500) | |
| 1-192, gnl|Hg17|chr10 (17311800-17311991) | |
| 1-192, gnl|Mm7|chr2 (13513962-13514153) | |
| 339-515, gnl|bosTau2|chr19 (37396461-37396637) | |
| 339-515, gnl|canFam2|chr9 (21888795-21888588) | |
| 339-515, gnl|danRer3|chr3 (28783118-28782940) | |
| 339-515, gnl|dasNov1|scaffold_12584 (32083-31873) | |
| 339-515, gnl|echTel1|scaffold_309806 (721-544) | |
| 339-515, gnl|fr1|chrUn (18329768-18329954) | |
| 339-515, gnl|galGal2|chr27 (1599085-1598904) | |
| 339-515, gnl|hg17|chr17 (40346160-40346370) | |
| 339-515, gnl|Hg17|chr17 (40346334-40346158) | |
| 339-515, gnl|loxAfr1|scaffold_5449 (14156-14362) | |
| 339-515, gnl|mm7|chr11 (103003417-103003624) | |
| 339-515, gnl|Mm7|chr11 (103003589-103003416) | |
| 339-515, gnl|monDom2|scaffold_18 (41663937-41663726) | |
| 339-515, gnl|oryCun1|scaffold_184120 (630-838) | |
| 339-515, gnl|panTro1|chr19 (43621920-43622130) | |
| 339-515, gnl|rheMac2|chr16 (55007522-55007732) | |
| 339-515, gnl|rn3|chr10 (92080374-92080582) | |
| 339-515, gnl|tetNig1|chr3 (13681015-13680847) | |
| 339-515, gnl|xenTro1|scaffold_553 (741062-740892) | |
| 636-756, gnl|bosTau2|chr19 (37398254-37398374) | |
| 636-756, gnl|canFam2|chr9 (21890631-21890513) | |
| 636-756, gnl|danRer3|chr3 (28784130-28784012) | |
| 636-756, gnl|dasNov1|scaffold_12584 (33810-33692) | |
| 636-756, gnl|echTel1|scaffold_309806 (1427-1309) | |
| 636-756, gnl|fr1|chrUn (18329344-18329462) | |
| 636-756, gnl|galGal2|chr27 (1599574-1599456) | |
| 636-756, gnl|hg17|chr17 (40344209-40344327) | |
| 636-756, gnl|Hg17|chr17 (40344351-40344231) | |
| 636-756, gnl|loxAfr1|scaffold_5449 (12154-12273) | |
| 636-756, gnl|mm7|chr11 (103002155-103002273) | |
| 636-756, gnl|Mm7|chr11 (103002297-103002177) | |
| 636-756, gnl|monDom2|scaffold_18 (41665065-41664947) | |
| 636-756, gnl|oryCun1|scaffold_178329 (51169-51051) | |
| 636-756, gnl|panTro1|chr19 (43619949-43620067) | |
| 636-756, gnl|rheMac2|chr12 (83269199-83269081) | |
| 636-756, gnl|rn3|chr10 (92079051-92079169) | |
| 636-756, gnl|tetNig1|chr3 (13681502-13681384) | |
| 636-756, gnl|xenTro1|scaffold_553 (743929-743811) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-192, gnl|bosTau2|chr13 (19897309-19897500) | |
| 1-192, gnl|Hg17|chr10 (17311800-17311991) | |
| 1-192, gnl|Mm7|chr2 (13513962-13514153) | |
| 339-515, gnl|bosTau2|chr19 (37396461-37396637) | |
| 339-515, gnl|canFam2|chr9 (21888795-21888588) | |
| 339-515, gnl|danRer3|chr3 (28783118-28782940) | |
| 339-515, gnl|dasNov1|scaffold_12584 (32083-31873) | |
| 339-515, gnl|echTel1|scaffold_309806 (721-544) | |
| 339-515, gnl|fr1|chrUn (18329768-18329954) | |
| 339-515, gnl|galGal2|chr27 (1599085-1598904) | |
| 339-515, gnl|hg17|chr17 (40346160-40346370) | |
| 339-515, gnl|Hg17|chr17 (40346334-40346158) | |
| 339-515, gnl|loxAfr1|scaffold_5449 (14156-14362) | |
| 339-515, gnl|mm7|chr11 (103003417-103003624) | |
| 339-515, gnl|Mm7|chr11 (103003589-103003416) | |
| 339-515, gnl|monDom2|scaffold_18 (41663937-41663726) | |
| 339-515, gnl|oryCun1|scaffold_184120 (630-838) | |
| 339-515, gnl|panTro1|chr19 (43621920-43622130) | |
| 339-515, gnl|rheMac2|chr16 (55007522-55007732) | |
| 339-515, gnl|rn3|chr10 (92080374-92080582) | |
| 339-515, gnl|tetNig1|chr3 (13681015-13680847) | |
| 339-515, gnl|xenTro1|scaffold_553 (741062-740892) | |
| 636-756, gnl|bosTau2|chr19 (37398254-37398374) | |
| 636-756, gnl|canFam2|chr9 (21890631-21890513) | |
| 636-756, gnl|danRer3|chr3 (28784130-28784012) | |
| 636-756, gnl|dasNov1|scaffold_12584 (33810-33692) | |
| 636-756, gnl|echTel1|scaffold_309806 (1427-1309) | |
| 636-756, gnl|fr1|chrUn (18329344-18329462) | |
| 636-756, gnl|galGal2|chr27 (1599574-1599456) | |
| 636-756, gnl|hg17|chr17 (40344209-40344327) | |
| 636-756, gnl|Hg17|chr17 (40344351-40344231) | |
| 636-756, gnl|loxAfr1|scaffold_5449 (12154-12273) | |
| 636-756, gnl|mm7|chr11 (103002155-103002273) | |
| 636-756, gnl|Mm7|chr11 (103002297-103002177) | |
| 636-756, gnl|monDom2|scaffold_18 (41665065-41664947) | |
| 636-756, gnl|oryCun1|scaffold_178329 (51169-51051) | |
| 636-756, gnl|panTro1|chr19 (43619949-43620067) | |
| 636-756, gnl|rheMac2|chr12 (83269199-83269081) | |
| 636-756, gnl|rn3|chr10 (92079051-92079169) | |
| 636-756, gnl|tetNig1|chr3 (13681502-13681384) | |
| 636-756, gnl|xenTro1|scaffold_553 (743929-743811) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |