Non-Coding RNA Search

Ss1.1-Pig2-101E23.5

Sequence:


               
               TCCTAAGGCGGGAGCGGGCTGCTGGGGCTTCTCTGTTGGAGGAAAGTGGCTGCAGTATAC
TGTTACCGAGATCAGAGTGAAGACACCTGGAGAGAAGTTGTCATTGCTAAGAGTGTCTCT
GGAAGACTCCTGGTCTGCGCATGNGAAAAATGAGGAAACAACTGACAAGTGAAGGGAGTT
TGCACAATGGAAACCACCCTGACCATCTCTTGACTTTATAGGGAGCATAGGTGGAAAGTT
CTCTTCGCTGGCACACATTCTTGGCCCTTCCACTTCTGGATCTCACTCAGCCCTGGATAA
AGTCAGTGACTGGATATCTTCTTCCGAGGTTTCCCCTGTTTTCCATCAGCCACAGCCCCT
TTATAAAGTCATATGGGTAGCCTTTGGATAGCTGTATCACACTGAAATGAGATATTGCTT
TCCTGCCTGTTTTCTAACCCCAAAAAAGTGCAACTTAGTTAAATAATGCCTTTTCTTTAC
AATACTGCCTTATAGTACTTTCCATTTGTTCTGAGTTTTAACTTTAAGGTAATATACTCT
TGGCAAACACACCACATTCCCCTTAAAATCCATTCAGCCAACATTTTTCTCTATTCTATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTAAGGCGGGAGCGGGCTGCTGGGGCTTCTCTGTTGGAGGAAAGTGGCTGCAGTATAC
TGTTACCGAGATCAGAGTGAAGACACCTGGAGAGAAGTTGTCATTGCTAAGAGTGTCTCT
GGAAGACTCCTGGTCTGCGCATGNGAAAAATGAGGAAACAACTGACAAGTGAAGGGAGTT
TGCACAATGGAAACCACCCTGACCATCTCTTGACTTTATAGGGAGCATAGGTGGAAAGTT
CTCTTCGCTGGCACACATTCTTGGCCCTTCCACTTCTGGATCTCACTCAGCCCTGGATAA
AGTCAGTGACTGGATATCTTCTTCCGAGGTTTCCCCTGTTTTCCATCAGCCACAGCCCCT
TTATAAAGTCATATGGGTAGCCTTTGGATAGCTGTATCACACTGAAATGAGATATTGCTT
TCCTGCCTGTTTTCTAACCCCAAAAAAGTGCAACTTAGTTAAATAATGCCTTTTCTTTAC
AATACTGCCTTATAGTACTTTCCATTTGTTCTGAGTTTTAACTTTAAGGTAATATACTCT
TGGCAAACACACCACATTCCCCTTAAAATCCATTCAGCCAACATTTTTCTCTATTCTATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               230-572, gnl|bosTau2|chr6 (746338-745992)
               

               
               230-572, gnl|Hg17|chr4 (120776543-120776881)
               

               
               230-572, gnl|Mm7|chr3 (122696050-122695473)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               230-572, gnl|bosTau2|chr6 (746338-745992)
               

               
               230-572, gnl|Hg17|chr4 (120776543-120776881)
               

               
               230-572, gnl|Mm7|chr3 (122696050-122695473)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               vin (0.332557)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)

	230-572, gnl\|bosTau2\|chr6 (746338-745992)
	230-572, gnl\|Hg17\|chr4 (120776543-120776881)
	230-572, gnl\|Mm7\|chr3 (122696050-122695473)