Non-Coding RNA Search

Ss1.1-Pig2-102O22.5

Sequence:


               
               AGATTACTGAGTTGAGACGCACTATCCAAGGTCTGGAGATCGAGCTACAGTCCCAACTAG
CCCTGGTAAGTTTAATAATTCTCTCATGAAATGACCTCATATTGTCATGCAAGGTTTCCT
GCTCACCTAAGAATAGGCAACACAGGAGAAAATGAAAGGTCAGTGATAAGAAAGGAGAAA
TAAAGGTGGAGCTCTTTGTTAATGAAAGAAAAGCACTACTGGCATTCATCTAAAAGTGCT
GAAATTGAAATGTAGCCATTAAACCTAAAAACACAAAACTACTCGTTTTCTTTATTCCTC
TACATGGCTTATTAAATTATTAAACAAACTCCGCTACACTCAACTGAACAATGACGTCCT
TAAACTACAATATATTCTCACTTCTTTATAGAAACAATCCCTGGAAGCCTCCTTGGCAGA
GACAGAAGGTCGCTACTGTGTGCAGCTCGCTCAGATTCAGTCCCAGATCACCGCGCTGGA
AGAACAACTGCAGCAGATTCGAGCCGAAACCGAGTGCCAGAATGCCGAATACCAACAACT
CCTGGATATTAAGATCCGACTGGAGAATGAAATTCAAACCTACCGCAGCCTGCTAGAAGG
AGAGGGAAGTTCCGGCGGCTTCACCCACAGCGGCGGGCGAGGCGGCGGAAGTTCCGGCGG
CGGCGGCGGCAGCTACGGCGGCGGAAGTTCCGGCGGCGGCGGCGGCAGCTACGGCGGCGG
AAGTTCCGGCGGCGGCGGCGGCAGCTACGGCGGCGGAAGTTCCGGCGGCGGCGGCGGCAG
CTACGGCGGCGGAAGTTCCGGCGGTGGCGGCGGCAGCTACGGCGGCGGCAGTTCCGGCGG
CGGCGGCGGCTCCAGCGGAGGCCTCAAGTCCTCATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATTACTGAGTTGAGACGCACTATCCAAGGTCTGGAGATCGAGCTACAGTCCCAACTAG
CCCTGGTAAGTTTAATAATTCTCTCATGAAATGACCTCATATTGTCATGCAAGGTTTCCT
GCTCACCTAAGAATAGGCAACACAGGAGAAAATGAAAGGTCAGTGATAAGAAAGGAGAAA
TAAAGGTGGAGCTCTTTGTTAATGAAAGAAAAGCACTACTGGCATTCATCTAAAAGTGCT
GAAATTGAAATGTAGCCATTAAACCTAAAAACACAAAACTACTCGTTTTCTTTATTCCTC
TACATGGCTTATTAAATTATTAAACAAACTCCGCTACACTCAACTGAACAATGACGTCCT
TAAACTACAATATATTCTCACTTCTTTATAGAAACAATCCCTGGAAGCCTCCTTGGCAGA
GACAGAAGGTCGCTACTGTGTGCAGCTCGCTCAGATTCAGTCCCAGATCACCGCGCTGGA
AGAACAACTGCAGCAGATTCGAGCCGAAACCGAGTGCCAGAATGCCGAATACCAACAACT
CCTGGATATTAAGATCCGACTGGAGAATGAAATTCAAACCTACCGCAGCCTGCTAGAAGG
AGAGGGAAGTTCCGGCGGCTTCACCCACAGCGGCGGGCGAGGCGGCGGAAGTTCCGGCGG
CGGCGGCGGCAGCTACGGCGGCGGAAGTTCCGGCGGCGGCGGCGGCAGCTACGGCGGCGG
AAGTTCCGGCGGCGGCGGCGGCAGCTACGGCGGCGGAAGTTCCGGCGGCGGCGGCGGCAG
CTACGGCGGCGGAAGTTCCGGCGGTGGCGGCGGCAGCTACGGCGGCGGCAGTTCCGGCGG
CGGCGGCGGCTCCAGCGGAGGCCTCAAGTCCTCATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-609, gnl|bosTau2|chr19 (33816965-33817555)
               

               
               1-609, gnl|Hg17|chr17 (36229891-36229295)
               

               
               1-609, gnl|Mm7|chr11 (99496101-99495570)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-609, gnl|bosTau2|chr19 (33816965-33817555)
               

               
               1-609, gnl|Hg17|chr17 (36229891-36229295)
               

               
               1-609, gnl|Mm7|chr11 (99496101-99495570)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	1-609, gnl\|bosTau2\|chr19 (33816965-33817555)
	1-609, gnl\|Hg17\|chr17 (36229891-36229295)
	1-609, gnl\|Mm7\|chr11 (99496101-99495570)