Non-Coding RNA Search

Ss1.1-Pig2-103H20.5

Sequence:


               
               CACCACAGCCACAGCAATGTGGGATCCGAGCTGCGTCTGCAATCTACACCACAACTCATG
GCAACACCAGATCTTTAATCCTTTGAGCGAGGCCAGGGATCGAACCCATAACCTCATGGT
TCCTAGTCAGATTCATTTCCACTGTACCACAACAGGAACTCCTAACAGTTTTCTTTTTAA
AGAATAACCTTACTCCAAATTCCCATGTATTCATAGGAATATCCATCTCTTAAAGTGACT
ACAAATTACTTTTTAAAACATCTTTTTCATAATCCATCAATGCAGTTTACTAAGAACCTG
ATAATATTTCTTTTTATGATAATCTGACTCCAGAACTCTTCCTTCAGAGCTTACTTGTAA
TTCAGGCATTTTAGCAGTGGCATATTAGATTTAATTGACTAATCACAAAAACAATACTGA
GTGCTTTGCAAAACAAACAAAAAGGCAAAAAAACCCAAAAAAACATGTCTTCCAGCTATG
TTATTTTAACTGTCTAACTTAACCTAGTTTTTTTCCCCCATAATTGATAATAAATTAATC
TGATTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCACAGCCACAGCAATGTGGGATCCGAGCTGCGTCTGCAATCTACACCACAACTCATG
GCAACACCAGATCTTTAATCCTTTGAGCGAGGCCAGGGATCGAACCCATAACCTCATGGT
TCCTAGTCAGATTCATTTCCACTGTACCACAACAGGAACTCCTAACAGTTTTCTTTTTAA
AGAATAACCTTACTCCAAATTCCCATGTATTCATAGGAATATCCATCTCTTAAAGTGACT
ACAAATTACTTTTTAAAACATCTTTTTCATAATCCATCAATGCAGTTTACTAAGAACCTG
ATAATATTTCTTTTTATGATAATCTGACTCCAGAACTCTTCCTTCAGAGCTTACTTGTAA
TTCAGGCATTTTAGCAGTGGCATATTAGATTTAATTGACTAATCACAAAAACAATACTGA
GTGCTTTGCAAAACAAACAAAAAGGCAAAAAAACCCAAAAAAACATGTCTTCCAGCTATG
TTATTTTAACTGTCTAACTTAACCTAGTTTTTTTCCCCCATAATTGATAATAAATTAATC
TGATTGAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               158-389, gnl|bosTau2|chr7 (64848228-64848461)
               

               
               158-389, gnl|Hg17|chr5 (102393656-102394068)
               

               
               158-389, gnl|Mm7|chr1 (97672965-97672732)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               158-389, gnl|bosTau2|chr7 (64848228-64848461)
               

               
               158-389, gnl|Hg17|chr5 (102393656-102394068)
               

               
               158-389, gnl|Mm7|chr1 (97672965-97672732)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbe (0.239234)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)

	158-389, gnl\|bosTau2\|chr7 (64848228-64848461)
	158-389, gnl\|Hg17\|chr5 (102393656-102394068)
	158-389, gnl\|Mm7\|chr1 (97672965-97672732)