Non-Coding RNA Search

Ss1.1-Pig2-103I09.5

Sequence:


               
               GCGCAGACGACTCTCATTTCGGAGGTTACAATCCTTTCCAGTCTATTTCGGGACGCGGGG
CGCAGGGATCTGCGACCGAACGACAGGTCTCTCACGCAATCGCCGTGCCGGCTTTTCTCC
GAGTCCAGCTTCTCCTTGGAGCGCTAGCTGGAAGCCGGTCCGCTAGGCGGGTCTCCACCC
CGCCCCGGGCTTGGCCCCGAGCAGCCGACTCTCCCTTCGGCGCAGGCACCTGCCTGGCCG
CCTCGCTCGGCGGGGTCCTGAGGCGCCTCGGGGAAGCGCGGCGATTGGCTGAGGCTCGGG
GCTGGTGCTGGGCTCCGGCGCCGCTTGACAACCGCAGTCGGCTGGAGGCTGAGCTGAGCG
GTCGCGGGGCCGGGAGGGGCAGACGGGAGGAAGGACGCACTGACGAGCTGATGGATTGAC
GCGCGGGTGGCAGGAGGCAGGACTGACGCGGAGCCCAGACCGCCGCCCTCGCGCTCTCTC
TCTAGCCCAGAGCCGGCCGCTTCGGGGCCCCGTCCTCTGGACTCCTCGCCGCTTTCTCCT
CCGCCACTTCTCCGGGCTTGTCCCGGAGCCCTCAGGCTATCAGCATGACGGCTGAAGAAA
CAGTGAATGTGAAAGAGGTTGAAATCATAAAGCTAATTTTAGACTTCTTGAATTCGAAGA
AGCTTCACATTAGTATGTTGGCCCTAGAGAAGGAAAGTGGAGTCATCAATGGCCTATTTT
CAGATGATATGCTTTTCCTGAGGCAGCTAATCCTTGATGGTCAGTGGGATGAAGTTCTTC
AGTTCATTCAGCCTCTAGAATGTATGGAAAAATTTGACAAAAAAAGGTTTCGTTATATCA
TCCTGAAGCAGAAGTTTTTAGAAGCTTTATGTGTTAACAATGCAATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGCAGACGACTCTCATTTCGGAGGTTACAATCCTTTCCAGTCTATTTCGGGACGCGGGG
CGCAGGGATCTGCGACCGAACGACAGGTCTCTCACGCAATCGCCGTGCCGGCTTTTCTCC
GAGTCCAGCTTCTCCTTGGAGCGCTAGCTGGAAGCCGGTCCGCTAGGCGGGTCTCCACCC
CGCCCCGGGCTTGGCCCCGAGCAGCCGACTCTCCCTTCGGCGCAGGCACCTGCCTGGCCG
CCTCGCTCGGCGGGGTCCTGAGGCGCCTCGGGGAAGCGCGGCGATTGGCTGAGGCTCGGG
GCTGGTGCTGGGCTCCGGCGCCGCTTGACAACCGCAGTCGGCTGGAGGCTGAGCTGAGCG
GTCGCGGGGCCGGGAGGGGCAGACGGGAGGAAGGACGCACTGACGAGCTGATGGATTGAC
GCGCGGGTGGCAGGAGGCAGGACTGACGCGGAGCCCAGACCGCCGCCCTCGCGCTCTCTC
TCTAGCCCAGAGCCGGCCGCTTCGGGGCCCCGTCCTCTGGACTCCTCGCCGCTTTCTCCT
CCGCCACTTCTCCGGGCTTGTCCCGGAGCCCTCAGGCTATCAGCATGACGGCTGAAGAAA
CAGTGAATGTGAAAGAGGTTGAAATCATAAAGCTAATTTTAGACTTCTTGAATTCGAAGA
AGCTTCACATTAGTATGTTGGCCCTAGAGAAGGAAAGTGGAGTCATCAATGGCCTATTTT
CAGATGATATGCTTTTCCTGAGGCAGCTAATCCTTGATGGTCAGTGGGATGAAGTTCTTC
AGTTCATTCAGCCTCTAGAATGTATGGAAAAATTTGACAAAAAAAGGTTTCGTTATATCA
TCCTGAAGCAGAAGTTTTTAGAAGCTTTATGTGTTAACAATGCAATGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-576, gnl|bosTau2|chr3 (31281768-31282352)
               

               
               1-576, gnl|Hg17|chr1 (109297174-109296525)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-576, gnl|bosTau2|chr3 (31281768-31282352)
               

               
               1-576, gnl|Hg17|chr1 (109297174-109296525)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sto (0.179824)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)

	1-576, gnl\|bosTau2\|chr3 (31281768-31282352)
	1-576, gnl\|Hg17\|chr1 (109297174-109296525)