Ss1.1-Pig2-106L03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGAATGCCGGGGGTTAGGGAAGTCGGTTGGGAAGAGAGCCTGAGCAACAGAAATGAGC CCAGAAAAGCATCCTGAGGAAGAGGATGAGGTGGCCTGCGTTCTCCTTTCAGCGTCCAAG ATCCTAAATTCCTCTGAAGGGGTAAAGGAAAATGGTGGCAGTGAAAAAGAATATAGCTGC ACATCAGAATCAGAAAATCAAATCCAACCGCAATCAGCACTGAAAGCCCTTCAGCATCAA CTGGAATCATTTCAGGCTCTCCGAATACAGACTTTACAGAATGTTAGCATGGTGCAGTCT GAAATCAGTGAGATATTGAACAAAAGTATTATTGAAGTCGAAAACCCACAATTTAGTTCA GAAAAAAATCTAGTATTCGGCACATGCAATGAAAAGGCTTTGGGTGACTGGGCTGTCGGA GATGAAAATAAGGAAAGTCCTGTCCTAAAAGCCACAAAAGACCCTATACAGAATCAAGAA GAAACCCTTTCTATGGAGAAAATTCATCATTTTGAGGATTCTAGGACTCTTCATTCAGTG GAAGAAAAAGTCAGCACCGATAGCATTAACAGTCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGAATGCCGGGGGTTAGGGAAGTCGGTTGGGAAGAGAGCCTGAGCAACAGAAATGAGC CCAGAAAAGCATCCTGAGGAAGAGGATGAGGTGGCCTGCGTTCTCCTTTCAGCGTCCAAG ATCCTAAATTCCTCTGAAGGGGTAAAGGAAAATGGTGGCAGTGAAAAAGAATATAGCTGC ACATCAGAATCAGAAAATCAAATCCAACCGCAATCAGCACTGAAAGCCCTTCAGCATCAA CTGGAATCATTTCAGGCTCTCCGAATACAGACTTTACAGAATGTTAGCATGGTGCAGTCT GAAATCAGTGAGATATTGAACAAAAGTATTATTGAAGTCGAAAACCCACAATTTAGTTCA GAAAAAAATCTAGTATTCGGCACATGCAATGAAAAGGCTTTGGGTGACTGGGCTGTCGGA GATGAAAATAAGGAAAGTCCTGTCCTAAAAGCCACAAAAGACCCTATACAGAATCAAGAA GAAACCCTTTCTATGGAGAAAATTCATCATTTTGAGGATTCTAGGACTCTTCATTCAGTG GAAGAAAAAGTCAGCACCGATAGCATTAACAGTCGC |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 62-169, gnl|bosTau2|chr27 (9449300-9449407) | |
| 62-169, gnl|Hg17|chr4 (186767355-186767248) | |
| 62-169, gnl|Mm7|chr8 (44712920-44713027) | |
| 291-403, gnl|bosTau2|chr27 (9457858-9457970) | |
| 291-403, gnl|canFam2|chr16 (48137856-48137707) | |
| 291-403, gnl|dasNov1|scaffold_24842 (44219-44368) | |
| 291-403, gnl|echTel1|scaffold_66688 (4714-4570) | |
| 291-403, gnl|galGal2|chr4 (61556524-61556638) | |
| 291-403, gnl|hg17|chr4 (186757346-186757490) | |
| 291-403, gnl|Hg17|chr4 (186757463-186757351) | |
| 291-403, gnl|mm7|chr8 (44718513-44718364) | |
| 291-403, gnl|Mm7|chr8 (44718394-44718506) | |
| 291-403, gnl|monDom2|scaffold_9 (67821744-67821885) | |
| 291-403, gnl|panTro1|chr3 (204964356-204964500) | |
| 291-403, gnl|rheMac2|chr5 (177568314-177568453) | |
| 291-403, gnl|rn3|chr16 (49607500-49607649) | |
| 463-574, gnl|bosTau2|chr27 (9458801-9458912) | |
| 463-574, gnl|canFam2|chr16 (48139124-48138855) | |
| 463-574, gnl|echTel1|scaffold_66688 (5837-5553) | |
| 463-574, gnl|hg17|chr4 (186756246-186756527) | |
| 463-574, gnl|Hg17|chr4 (186756541-186756430) | |
| 463-574, gnl|mm7|chr8 (44719603-44719343) | |
| 463-574, gnl|monDom2|scaffold_9 (67815569-67815835) | |
| 463-574, gnl|oryCun1|scaffold_201080 (337840-337562) | |
| 463-574, gnl|panTro1|chr3 (204963257-204963538) | |
| 463-574, gnl|rheMac2|chr5 (177567213-177567491) | |
| 463-574, gnl|rn3|chr16 (49605892-49606179) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 62-169, gnl|bosTau2|chr27 (9449300-9449407) | |
| 62-169, gnl|Hg17|chr4 (186767355-186767248) | |
| 62-169, gnl|Mm7|chr8 (44712920-44713027) | |
| 291-403, gnl|bosTau2|chr27 (9457858-9457970) | |
| 291-403, gnl|canFam2|chr16 (48137856-48137707) | |
| 291-403, gnl|dasNov1|scaffold_24842 (44219-44368) | |
| 291-403, gnl|echTel1|scaffold_66688 (4714-4570) | |
| 291-403, gnl|galGal2|chr4 (61556524-61556638) | |
| 291-403, gnl|hg17|chr4 (186757346-186757490) | |
| 291-403, gnl|Hg17|chr4 (186757463-186757351) | |
| 291-403, gnl|mm7|chr8 (44718513-44718364) | |
| 291-403, gnl|Mm7|chr8 (44718394-44718506) | |
| 291-403, gnl|monDom2|scaffold_9 (67821744-67821885) | |
| 291-403, gnl|panTro1|chr3 (204964356-204964500) | |
| 291-403, gnl|rheMac2|chr5 (177568314-177568453) | |
| 291-403, gnl|rn3|chr16 (49607500-49607649) | |
| 463-574, gnl|bosTau2|chr27 (9458801-9458912) | |
| 463-574, gnl|canFam2|chr16 (48139124-48138855) | |
| 463-574, gnl|echTel1|scaffold_66688 (5837-5553) | |
| 463-574, gnl|hg17|chr4 (186756246-186756527) | |
| 463-574, gnl|Hg17|chr4 (186756541-186756430) | |
| 463-574, gnl|mm7|chr8 (44719603-44719343) | |
| 463-574, gnl|monDom2|scaffold_9 (67815569-67815835) | |
| 463-574, gnl|oryCun1|scaffold_201080 (337840-337562) | |
| 463-574, gnl|panTro1|chr3 (204963257-204963538) | |
| 463-574, gnl|rheMac2|chr5 (177567213-177567491) | |
| 463-574, gnl|rn3|chr16 (49605892-49606179) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| tes (0.207814) |