Non-Coding RNA Search

Ss1.1-Pig2-107E05.5

Sequence:


               
               GCCGCACTTGGCGCTTGCCCTTCCCGCTCTTCCTCTCCCGCTGTATTTAACCCTCTGACT
GTTAGCCTCGCTCCGCCGGCTGGCATCTTCGGCTTTGCCAGGCTTGCGTCTCTGCTGTAC
TCTCTCTCCTGTCCAGCTCTTGCGGGTTCTTCCCGTCCCTCCTCCTCCCCCCCGCCTCTC
CGGCTCACTCGTACTAGAGCCAGAAGGCTACACGCCTAGGCGTCTACTGGAGAACAAGCT
TCAGCTGAGGGAGAACTTAACCGCTGAAGGTTGGGTAGGTGCGGCAGAAGGGGTTTCAGT
GGCGAAAGCTACCAGCTGAAGTAGCATGGCCTCGAGAAGCGCCTTCGCTGCCGCCGCGCT
CCAGCTCTGGAGCATCCTCCCGTGCCTGCTGGTGCTGCGGGCGGAGGTCGGGCAGCCGCC
GGAAGAGAGCCTGTACCTGTGGATCGATGCTCACCAGGCAAGAGTGCTCATAGGGTTTGA
AGAAGATATCTTGATTGTTTCAGAGGGGAAAATGGCCCCTTTTACACATGATTTCAGGAA
AGCACAACAGAGAATGCCAGCTATTCCTGTCAACATCCATTCCAGGAATTTCACCTGGCA
AGCTGCAGGGCGGGCCGAATACTTCTATGAATTCCTGTCCTTGCGCTCCCTGGATAAAGG
CATCATGGCAGACCCAACTGTCAATGTCCCTCTGCTGGGAACCGTGCCTCACAAGGCATC
AGTCGTGCAAGTTGGTTTCCCATGTCTTGGAAAACAAGATGGAGTGGCAGCATTTGAAGT
GAATGTGATTGTAATGAATTCTGAAGGCAACGCCATCCTGCAGACGCCTCAGAACGCCAT
CTTCTTTAAAACATGTCAACAAGCTGAGTGCCCAGGAGGGTGCCGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGCACTTGGCGCTTGCCCTTCCCGCTCTTCCTCTCCCGCTGTATTTAACCCTCTGACT
GTTAGCCTCGCTCCGCCGGCTGGCATCTTCGGCTTTGCCAGGCTTGCGTCTCTGCTGTAC
TCTCTCTCCTGTCCAGCTCTTGCGGGTTCTTCCCGTCCCTCCTCCTCCCCCCCGCCTCTC
CGGCTCACTCGTACTAGAGCCAGAAGGCTACACGCCTAGGCGTCTACTGGAGAACAAGCT
TCAGCTGAGGGAGAACTTAACCGCTGAAGGTTGGGTAGGTGCGGCAGAAGGGGTTTCAGT
GGCGAAAGCTACCAGCTGAAGTAGCATGGCCTCGAGAAGCGCCTTCGCTGCCGCCGCGCT
CCAGCTCTGGAGCATCCTCCCGTGCCTGCTGGTGCTGCGGGCGGAGGTCGGGCAGCCGCC
GGAAGAGAGCCTGTACCTGTGGATCGATGCTCACCAGGCAAGAGTGCTCATAGGGTTTGA
AGAAGATATCTTGATTGTTTCAGAGGGGAAAATGGCCCCTTTTACACATGATTTCAGGAA
AGCACAACAGAGAATGCCAGCTATTCCTGTCAACATCCATTCCAGGAATTTCACCTGGCA
AGCTGCAGGGCGGGCCGAATACTTCTATGAATTCCTGTCCTTGCGCTCCCTGGATAAAGG
CATCATGGCAGACCCAACTGTCAATGTCCCTCTGCTGGGAACCGTGCCTCACAAGGCATC
AGTCGTGCAAGTTGGTTTCCCATGTCTTGGAAAACAAGATGGAGTGGCAGCATTTGAAGT
GAATGTGATTGTAATGAATTCTGAAGGCAACGCCATCCTGCAGACGCCTCAGAACGCCAT
CTTCTTTAAAACATGTCAACAAGCTGAGTGCCCAGGAGGGTGCCGAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61864623|ref|XP_613151.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61864623|ref|XP_613151.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-474, gnl|bosTau2|chr5 (30242282-30241784)
               

               
               2-474, gnl|Hg17|chr12 (63801594-63801090)
               

               
               2-474, gnl|Mm7|chr10 (120430221-120430719)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-474, gnl|bosTau2|chr5 (30242282-30241784)
               

               
               2-474, gnl|Hg17|chr12 (63801594-63801090)
               

               
               2-474, gnl|Mm7|chr10 (120430221-120430719)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ton (0.1755)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)

	2-474, gnl\|bosTau2\|chr5 (30242282-30241784)
	2-474, gnl\|Hg17\|chr12 (63801594-63801090)
	2-474, gnl\|Mm7\|chr10 (120430221-120430719)