Ss1.1-Pig2-107G07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCACACAGCGTTCTGAAGCTCTTTAAAAGCAACTAACTTATGTCAGTTAACTAGGTTTGG AAAGGTGACCCAAAATCTCAGACATCTGCCTCAGAGTGAACTCTGGGAGTGCGAGGACCA GTGCCAGATCCTCTGTTGCCTTATCATGTACAGCAGAGCTTACATATTGCTGCAAAGAGA CTTCCAAGAGTTGAAGAGGAACAATGATAAGGGTATTAATGCCTTTCCTATCAGTGAAGA TTTGTTGGAATGGGAAGTTGATATTAAAGGTCTGCAGAATACAATTTGGCAAGGATCATT CTTCCAACTGACAATAAGTTTTACATCAGAGTACAATTTTGTCCCTCCAGTTGTGCGATT TAGAACGATTCCTTTTCATCCAAATGGTTATGCTTTCTAATCCAGTGTTAGAAAATCCGG TGAATTTGGAAGCAGCCCAAATATTGATGAAAGATGAAACTCTGTACAGATTAATAATTC TAAGACTTTCCCGCCAGGCATTAAAATTGAACAATGACAGTTCTGAGTCACATAAAGAGC CAGATAAACTTATCAGTGCTTGACGATCCAGATTTCATTGGAGAGTATTATAAGTGGAAG AAAAATGAGATAAGACATCCCAAAGAATGGCATTTAAAGTATGCTACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCACACAGCGTTCTGAAGCTCTTTAAAAGCAACTAACTTATGTCAGTTAACTAGGTTTGG AAAGGTGACCCAAAATCTCAGACATCTGCCTCAGAGTGAACTCTGGGAGTGCGAGGACCA GTGCCAGATCCTCTGTTGCCTTATCATGTACAGCAGAGCTTACATATTGCTGCAAAGAGA CTTCCAAGAGTTGAAGAGGAACAATGATAAGGGTATTAATGCCTTTCCTATCAGTGAAGA TTTGTTGGAATGGGAAGTTGATATTAAAGGTCTGCAGAATACAATTTGGCAAGGATCATT CTTCCAACTGACAATAAGTTTTACATCAGAGTACAATTTTGTCCCTCCAGTTGTGCGATT TAGAACGATTCCTTTTCATCCAAATGGTTATGCTTTCTAATCCAGTGTTAGAAAATCCGG TGAATTTGGAAGCAGCCCAAATATTGATGAAAGATGAAACTCTGTACAGATTAATAATTC TAAGACTTTCCCGCCAGGCATTAAAATTGAACAATGACAGTTCTGAGTCACATAAAGAGC CAGATAAACTTATCAGTGCTTGACGATCCAGATTTCATTGGAGAGTATTATAAGTGGAAG AAAAATGAGATAAGACATCCCAAAGAATGGCATTTAAAGTATGCTACT |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 5-221, gnl|bosTau2|chr3 (54083879-54084093) | |
| 5-221, gnl|canFam2|chr5 (49000137-48999322) | |
| 5-221, gnl|echTel1|scaffold_294817 (62441-61600) | |
| 5-221, gnl|hg17|chr1 (64381024-64381861) | |
| 5-221, gnl|Hg17|chr1 (64381617-64381830) | |
| 5-221, gnl|loxAfr1|scaffold_756 (13783-12940) | |
| 5-221, gnl|mm7|chr4 (99855003-99855727) | |
| 5-221, gnl|Mm7|chr4 (99855516-99855696) | |
| 5-221, gnl|oryCun1|scaffold_187278 (1046-235) | |
| 5-221, gnl|panTro1|chr1 (62719503-62720335) | |
| 5-221, gnl|rheMac2|chr1 (66991288-66992123) | |
| 5-221, gnl|rn3|chr5 (121133588-121134338) | |
| 379-518, gnl|bosTau2|chr3 (54100233-54100373) | |
| 379-518, gnl|canFam2|chr26 (22779068-22779136) | |
| 379-518, gnl|canFam2|chr5 (48985478-48985297) | |
| 379-518, gnl|hg17|chr1 (64392460-64392664) | |
| 379-518, gnl|Hg17|chr1 (64392511-64392648) | |
| 379-518, gnl|hg17|chr22 (24726880-24726991) | |
| 379-518, gnl|loxAfr1|scaffold_191958 (43-148) | |
| 379-518, gnl|loxAfr1|scaffold_191958 (252-55) | |
| 379-518, gnl|mm7|chr4 (99866688-99866579) | |
| 379-518, gnl|mm7|chr4 (99866488-99866667) | |
| 379-518, gnl|Mm7|chr4 (99866526-99866666) | |
| 379-518, gnl|oryCun1|scaffold_203757 (480988-480879) | |
| 379-518, gnl|oryCun1|scaffold_203757 (480792-480978) | |
| 379-518, gnl|panTro1|chr1 (62730912-62731118) | |
| 379-518, gnl|panTro1|chr23 (24806514-24806625) | |
| 379-518, gnl|rheMac2|chr1 (67002728-67002930) | |
| 379-518, gnl|rheMac2|chr10 (69837512-69837621) | |
| 379-518, gnl|rn3|chr5 (121144112-121144003) | |
| 379-518, gnl|rn3|chr5 (121143909-121144096) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-221, gnl|bosTau2|chr3 (54083879-54084093) | |
| 5-221, gnl|canFam2|chr5 (49000137-48999322) | |
| 5-221, gnl|echTel1|scaffold_294817 (62441-61600) | |
| 5-221, gnl|hg17|chr1 (64381024-64381861) | |
| 5-221, gnl|Hg17|chr1 (64381617-64381830) | |
| 5-221, gnl|loxAfr1|scaffold_756 (13783-12940) | |
| 5-221, gnl|mm7|chr4 (99855003-99855727) | |
| 5-221, gnl|Mm7|chr4 (99855516-99855696) | |
| 5-221, gnl|oryCun1|scaffold_187278 (1046-235) | |
| 5-221, gnl|panTro1|chr1 (62719503-62720335) | |
| 5-221, gnl|rheMac2|chr1 (66991288-66992123) | |
| 5-221, gnl|rn3|chr5 (121133588-121134338) | |
| 379-518, gnl|bosTau2|chr3 (54100233-54100373) | |
| 379-518, gnl|canFam2|chr26 (22779068-22779136) | |
| 379-518, gnl|canFam2|chr5 (48985478-48985297) | |
| 379-518, gnl|hg17|chr1 (64392460-64392664) | |
| 379-518, gnl|Hg17|chr1 (64392511-64392648) | |
| 379-518, gnl|hg17|chr22 (24726880-24726991) | |
| 379-518, gnl|loxAfr1|scaffold_191958 (43-148) | |
| 379-518, gnl|loxAfr1|scaffold_191958 (252-55) | |
| 379-518, gnl|mm7|chr4 (99866688-99866579) | |
| 379-518, gnl|mm7|chr4 (99866488-99866667) | |
| 379-518, gnl|Mm7|chr4 (99866526-99866666) | |
| 379-518, gnl|oryCun1|scaffold_203757 (480988-480879) | |
| 379-518, gnl|oryCun1|scaffold_203757 (480792-480978) | |
| 379-518, gnl|panTro1|chr1 (62730912-62731118) | |
| 379-518, gnl|panTro1|chr23 (24806514-24806625) | |
| 379-518, gnl|rheMac2|chr1 (67002728-67002930) | |
| 379-518, gnl|rheMac2|chr10 (69837512-69837621) | |
| 379-518, gnl|rn3|chr5 (121144112-121144003) | |
| 379-518, gnl|rn3|chr5 (121143909-121144096) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.58548) |