Non-Coding RNA Search

Ss1.1-Pig2-107M19.5

Sequence:


               
               GCAAGAGAAGGCCGTGTACCTGGCCCTCAACCAATGCAGCGTGAGCACCACGCACAAGTG
CCTCATCGCAGAGGCCTGGTGCGCCACGCGCGACCTGCCCACCGTGCAGCAGGCATTGCA
GGACAGCTCGAGCGAGGCGGGTGTGAGCGCCGTCGTGCACCGTATCCCCTGCCGGGACAT
GCCCCCCACGCTCGTCCGTACCAACCGCTTCACGGCCAGCTTCCAGGGCATCGTGGACGC
CTACGGCGTGGGCCGCTACCAGGAAGTCAACCCCGCACCCTACACCATCATCACCTTCCC
CTTCCTCTTCGCTGTCATGTTTGGAGACGTGGGCCACGGGCTGCTCATGTTCCTCTTCGC
CCTGGCCATGGTGCTGGCCGAGAACCGGCCGGCTGTGAAGACAGCGCAGAACGAGATCTG
GAGGACCTTCTTTGGTGGCCGCTACCTCCTCCTGCTCATGGGCCTGTTCTCTGTCTACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAAGAGAAGGCCGTGTACCTGGCCCTCAACCAATGCAGCGTGAGCACCACGCACAAGTG
CCTCATCGCAGAGGCCTGGTGCGCCACGCGCGACCTGCCCACCGTGCAGCAGGCATTGCA
GGACAGCTCGAGCGAGGCGGGTGTGAGCGCCGTCGTGCACCGTATCCCCTGCCGGGACAT
GCCCCCCACGCTCGTCCGTACCAACCGCTTCACGGCCAGCTTCCAGGGCATCGTGGACGC
CTACGGCGTGGGCCGCTACCAGGAAGTCAACCCCGCACCCTACACCATCATCACCTTCCC
CTTCCTCTTCGCTGTCATGTTTGGAGACGTGGGCCACGGGCTGCTCATGTTCCTCTTCGC
CCTGGCCATGGTGCTGGCCGAGAACCGGCCGGCTGTGAAGACAGCGCAGAACGAGATCTG
GAGGACCTTCTTTGGTGGCCGCTACCTCCTCCTGCTCATGGGCCTGTTCTCTGTCTACAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               130-275, gnl|bosTau2|chr29 (39492600-39492455)
               

               
               130-275, gnl|Hg17|chr11 (67569000-67569145)
               

               
               130-275, gnl|Mm7|chr19 (3796842-3796697)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               130-275, gnl|bosTau2|chr29 (39492600-39492455)
               

               
               130-275, gnl|Hg17|chr11 (67569000-67569145)
               

               
               130-275, gnl|Mm7|chr19 (3796842-3796697)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	130-275, gnl\|bosTau2\|chr29 (39492600-39492455)
	130-275, gnl\|Hg17\|chr11 (67569000-67569145)
	130-275, gnl\|Mm7\|chr19 (3796842-3796697)