Ss1.1-Pig2-107P09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGCGGGTGCGAGCGCTCGAGGTGGCGGCCCGCGGCTGGGCGGCCACGCACTGGCTCGAG GGCCGAAGCGTGGGTATAAACGCCGTGTCCAGCGACTACGCGGCTGCCGAGACGTACTTG CGGCGGCGGCAGCTGCTCCTCCGAGACACCGGAGAGATCACAACACTACCTCCTGGGCGC CATGAGTTCCCATTCAGCTTTCAGCTGCCACCGACTCTAGTAACTTCATTTGAAGGCAAA CATGGCAGTGTCCGATACTGCATCAAAGCCACCCTGCACCGTCCCTGGGTCCCTGCCCGC CGCACAAGGAAAGTGTTTACTGTTATCGAGCCTGTGGACATCAACACACCAGCTCTGCTG GCCCCTCAAGCGGGAGCTCGGGAGAAGATCGCCCGATCCTGGTACAGTAACCGTGGCCTT GTCTCCCTCTCAGCCAAGATCGACCGCAAGGGGTACACACCAGGTGAGGTGATCCCCGTC TTCGCCGAGATCGACAATGGCACCACACGCCCAGTGCTGCCCCGAGCGGCTGTGGTCCAG ACACAGACCTTCATGGCACGAGGTGCCCGCAAACAGAAACGAGCAGTGGTGGCTAGTCTC TCAGGGGAGCCTGTGGGCCCTGGGCGCCGGGCACTGTGGCAGGGCCGGGCGCTGCGGATC CCTCCTGTGGGTCCCTCTATCCTGCACTGCCGCGTGCTGCATGTGGACTATGCCCTCAAG GTCTGCGTGGACATCCCAGGCTCATCCAAGCTGCTCCTGGAGCTGCCGCTGGTCATCGGC ACCATCCCTCTGCATCCTTTTGGCAGCCGCTCGTCCAGCGTGGGCAGCCATGCCAGCTTC CTGCTGGATTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGCGGGTGCGAGCGCTCGAGGTGGCGGCCCGCGGCTGGGCGGCCACGCACTGGCTCGAG GGCCGAAGCGTGGGTATAAACGCCGTGTCCAGCGACTACGCGGCTGCCGAGACGTACTTG CGGCGGCGGCAGCTGCTCCTCCGAGACACCGGAGAGATCACAACACTACCTCCTGGGCGC CATGAGTTCCCATTCAGCTTTCAGCTGCCACCGACTCTAGTAACTTCATTTGAAGGCAAA CATGGCAGTGTCCGATACTGCATCAAAGCCACCCTGCACCGTCCCTGGGTCCCTGCCCGC CGCACAAGGAAAGTGTTTACTGTTATCGAGCCTGTGGACATCAACACACCAGCTCTGCTG GCCCCTCAAGCGGGAGCTCGGGAGAAGATCGCCCGATCCTGGTACAGTAACCGTGGCCTT GTCTCCCTCTCAGCCAAGATCGACCGCAAGGGGTACACACCAGGTGAGGTGATCCCCGTC TTCGCCGAGATCGACAATGGCACCACACGCCCAGTGCTGCCCCGAGCGGCTGTGGTCCAG ACACAGACCTTCATGGCACGAGGTGCCCGCAAACAGAAACGAGCAGTGGTGGCTAGTCTC TCAGGGGAGCCTGTGGGCCCTGGGCGCCGGGCACTGTGGCAGGGCCGGGCGCTGCGGATC CCTCCTGTGGGTCCCTCTATCCTGCACTGCCGCGTGCTGCATGTGGACTATGCCCTCAAG GTCTGCGTGGACATCCCAGGCTCATCCAAGCTGCTCCTGGAGCTGCCGCTGGTCATCGGC ACCATCCCTCTGCATCCTTTTGGCAGCCGCTCGTCCAGCGTGGGCAGCCATGCCAGCTTC CTGCTGGATTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 1-145, gnl|bosTau2|chr7 (4439048-4438904) | |
| 1-145, gnl|Hg17|chr19 (17973238-17973382) | |
| 1-145, gnl|Mm7|chr8 (69297151-69297030) | |
| 213-361, gnl|bosTau2|chr7 (4434624-4434476) | |
| 213-361, gnl|canFam2|chr20 (47935982-47935862) | |
| 213-361, gnl|danRer3|chrNA (125192910-125193030) | |
| 213-361, gnl|dasNov1|scaffold_76 (102266-102386) | |
| 213-361, gnl|echTel1|scaffold_310162 (41612-41489) | |
| 213-361, gnl|fr1|chrUn (247861108-247860990) | |
| 213-361, gnl|galGal2|chr28 (3347451-3347331) | |
| 213-361, gnl|hg17|chr19 (17980779-17980899) | |
| 213-361, gnl|Hg17|chr19 (17980780-17980928) | |
| 213-361, gnl|loxAfr1|scaffold_53142 (29785-29905) | |
| 213-361, gnl|mm7|chr8 (69293349-69293229) | |
| 213-361, gnl|Mm7|chr8 (69293346-69293198) | |
| 213-361, gnl|monDom2|scaffold_941 (7887-8007) | |
| 213-361, gnl|oryCun1|scaffold_181453 (75005-74885) | |
| 213-361, gnl|panTro1|chr20 (18971584-18971704) | |
| 213-361, gnl|rheMac2|chr19 (17582327-17582447) | |
| 213-361, gnl|rn3|chr16 (19109255-19109375) | |
| 213-361, gnl|tetNig1|chr1 (14908425-14908543) | |
| 213-361, gnl|xenTro1|scaffold_898 (459528-459408) | |
| 461-722, gnl|bosTau2|chr7 (4433782-4433521) | |
| 461-722, gnl|canFam2|chr20 (47935131-47934859) | |
| 461-722, gnl|danRer3|chrNA (125193325-125193596) | |
| 461-722, gnl|dasNov1|scaffold_76 (103613-103877) | |
| 461-722, gnl|echTel1|scaffold_310162 (40274-40003) | |
| 461-722, gnl|fr1|chrUn (247860692-247860421) | |
| 461-722, gnl|galGal2|chr28 (3346810-3346530) | |
| 461-722, gnl|hg17|chr19 (17981582-17981854) | |
| 461-722, gnl|Hg17|chr19 (17981589-17981850) | |
| 461-722, gnl|loxAfr1|scaffold_52462 (5135-5399) | |
| 461-722, gnl|mm7|chr8 (69291883-69291613) | |
| 461-722, gnl|Mm7|chr8 (69291873-69291613) | |
| 461-722, gnl|monDom2|scaffold_941 (9329-9598) | |
| 461-722, gnl|oryCun1|scaffold_181453 (73559-73294) | |
| 461-722, gnl|panTro1|chr20 (18972386-18972658) | |
| 461-722, gnl|rheMac2|chr19 (17583120-17583392) | |
| 461-722, gnl|rn3|chr16 (19110280-19110550) | |
| 461-722, gnl|tetNig1|chr1 (14908827-14909096) | |
| 461-722, gnl|xenTro1|scaffold_898 (458319-458055) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-145, gnl|bosTau2|chr7 (4439048-4438904) | |
| 1-145, gnl|Hg17|chr19 (17973238-17973382) | |
| 1-145, gnl|Mm7|chr8 (69297151-69297030) | |
| 213-361, gnl|bosTau2|chr7 (4434624-4434476) | |
| 213-361, gnl|canFam2|chr20 (47935982-47935862) | |
| 213-361, gnl|danRer3|chrNA (125192910-125193030) | |
| 213-361, gnl|dasNov1|scaffold_76 (102266-102386) | |
| 213-361, gnl|echTel1|scaffold_310162 (41612-41489) | |
| 213-361, gnl|fr1|chrUn (247861108-247860990) | |
| 213-361, gnl|galGal2|chr28 (3347451-3347331) | |
| 213-361, gnl|hg17|chr19 (17980779-17980899) | |
| 213-361, gnl|Hg17|chr19 (17980780-17980928) | |
| 213-361, gnl|loxAfr1|scaffold_53142 (29785-29905) | |
| 213-361, gnl|mm7|chr8 (69293349-69293229) | |
| 213-361, gnl|Mm7|chr8 (69293346-69293198) | |
| 213-361, gnl|monDom2|scaffold_941 (7887-8007) | |
| 213-361, gnl|oryCun1|scaffold_181453 (75005-74885) | |
| 213-361, gnl|panTro1|chr20 (18971584-18971704) | |
| 213-361, gnl|rheMac2|chr19 (17582327-17582447) | |
| 213-361, gnl|rn3|chr16 (19109255-19109375) | |
| 213-361, gnl|tetNig1|chr1 (14908425-14908543) | |
| 213-361, gnl|xenTro1|scaffold_898 (459528-459408) | |
| 461-722, gnl|bosTau2|chr7 (4433782-4433521) | |
| 461-722, gnl|canFam2|chr20 (47935131-47934859) | |
| 461-722, gnl|danRer3|chrNA (125193325-125193596) | |
| 461-722, gnl|dasNov1|scaffold_76 (103613-103877) | |
| 461-722, gnl|echTel1|scaffold_310162 (40274-40003) | |
| 461-722, gnl|fr1|chrUn (247860692-247860421) | |
| 461-722, gnl|galGal2|chr28 (3346810-3346530) | |
| 461-722, gnl|hg17|chr19 (17981582-17981854) | |
| 461-722, gnl|Hg17|chr19 (17981589-17981850) | |
| 461-722, gnl|loxAfr1|scaffold_52462 (5135-5399) | |
| 461-722, gnl|mm7|chr8 (69291883-69291613) | |
| 461-722, gnl|Mm7|chr8 (69291873-69291613) | |
| 461-722, gnl|monDom2|scaffold_941 (9329-9598) | |
| 461-722, gnl|oryCun1|scaffold_181453 (73559-73294) | |
| 461-722, gnl|panTro1|chr20 (18972386-18972658) | |
| 461-722, gnl|rheMac2|chr19 (17583120-17583392) | |
| 461-722, gnl|rn3|chr16 (19110280-19110550) | |
| 461-722, gnl|tetNig1|chr1 (14908827-14909096) | |
| 461-722, gnl|xenTro1|scaffold_898 (458319-458055) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |