Non-Coding RNA Search

Ss1.1-Pig2-108J06.5S

Sequence:


               
               AAGAAGCGGAGCTGGTATCTTACTTGGAAGTATAAACTGACCAACCAGCGGGCCCTGCGG
AGATGCTGTCAGACAGGCGCTGTGCTTTTCCTACTGGTGACCGTCATTGTCAACATCAAG
TTGATCCTGGACACGCGGCGAGCAATCAGCGAGGCCAGTGAAGACCCAGAGCCGGAACAA
GACTATGATGAGGCGCTGGGCCGATTGGAGCCCCCACGGCGCAGAGGCAGTGGCCCCCGA
CGGGTCCTGGATGTGGAGGTATATTCAAGCCGCAGCAAGGTGTATGTGGCAGTGGACGGC
ACGACGGTGCTGGAGGATGAGGCCCGGGAGCAGGGCCGGGGCATCCATGTCATCGTCCTC
AACCAGGCCACGGGCCATGTGATGGCAAAGCGTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAGCGGAGCTGGTATCTTACTTGGAAGTATAAACTGACCAACCAGCGGGCCCTGCGG
AGATGCTGTCAGACAGGCGCTGTGCTTTTCCTACTGGTGACCGTCATTGTCAACATCAAG
TTGATCCTGGACACGCGGCGAGCAATCAGCGAGGCCAGTGAAGACCCAGAGCCGGAACAA
GACTATGATGAGGCGCTGGGCCGATTGGAGCCCCCACGGCGCAGAGGCAGTGGCCCCCGA
CGGGTCCTGGATGTGGAGGTATATTCAAGCCGCAGCAAGGTGTATGTGGCAGTGGACGGC
ACGACGGTGCTGGAGGATGAGGCCCGGGAGCAGGGCCGGGGCATCCATGTCATCGTCCTC
AACCAGGCCACGGGCCATGTGATGGCAAAGCGTGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57999409|emb|CAH18478.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57999409|emb|CAH18478.2|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-396, gnl|bosTau2|chr19 (32781303-32781691)
               

               
               1-396, gnl|Hg17|chr1 (46375465-46373593)
               

               
               1-396, gnl|Mm7|chr4 (115527611-115529325)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-396, gnl|bosTau2|chr19 (32781303-32781691)
               

               
               1-396, gnl|Hg17|chr1 (46375465-46373593)
               

               
               1-396, gnl|Mm7|chr4 (115527611-115529325)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nje (0.16592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)

	1-396, gnl\|bosTau2\|chr19 (32781303-32781691)
	1-396, gnl\|Hg17\|chr1 (46375465-46373593)
	1-396, gnl\|Mm7\|chr4 (115527611-115529325)