Non-Coding RNA Search

Ss1.1-Pig2-10E10.5

Sequence:


               
               AAGGTTCTAATGATTTAAACCTGTACTACTGAATATTAAGCAGGACAGACTAAGCTCTCT
GGTGCGACTATCTTGAAGGAGTAATTTCTAAATATACAGAGGTAACTTGACTGTATATGT
TGCATCCTGTGTCACCTCCCTCCGTTGGTATTTGATAAAGATTTTAATTTATATGAATGA
AATTTCTAAAGCAGAATCAAAGTTCCTCTTGGGGAAATGTCAAGTCTTTAGTTAGGATAA
GCAATCCTGTATGAATAGTACCAAAGCATTACCACATGGTAGAAAACACATTCTAGTCAA
AATATTAAATTAGCTAAAAAATAAAATGTGCAAGTCTTCAGGATGGCACACGAAAAAAAA
AAAGGTTAATGCTTCTTGGGGCACATTTCTTAGAGGGCTTGCGAGTGTGTAAATAATTTA
TGTTACGTGACTGATGACTTCATTGAAAATCTGCACAATTCGGTTTTAGCTCTGGATTAC
TTCAGTTGACCTTTGTGAAGGTTTTATCTGCGTAGAATGGTTGTTTGACTTGTTTTAACC
TGTTATGGTTTGGGTTTGTTGTTGTTGTTGTTTTCATTCTCTAGTAAAGTAAAATTCTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGTTCTAATGATTTAAACCTGTACTACTGAATATTAAGCAGGACAGACTAAGCTCTCT
GGTGCGACTATCTTGAAGGAGTAATTTCTAAATATACAGAGGTAACTTGACTGTATATGT
TGCATCCTGTGTCACCTCCCTCCGTTGGTATTTGATAAAGATTTTAATTTATATGAATGA
AATTTCTAAAGCAGAATCAAAGTTCCTCTTGGGGAAATGTCAAGTCTTTAGTTAGGATAA
GCAATCCTGTATGAATAGTACCAAAGCATTACCACATGGTAGAAAACACATTCTAGTCAA
AATATTAAATTAGCTAAAAAATAAAATGTGCAAGTCTTCAGGATGGCACACGAAAAAAAA
AAAGGTTAATGCTTCTTGGGGCACATTTCTTAGAGGGCTTGCGAGTGTGTAAATAATTTA
TGTTACGTGACTGATGACTTCATTGAAAATCTGCACAATTCGGTTTTAGCTCTGGATTAC
TTCAGTTGACCTTTGTGAAGGTTTTATCTGCGTAGAATGGTTGTTTGACTTGTTTTAACC
TGTTATGGTTTGGGTTTGTTGTTGTTGTTGTTTTCATTCTCTAGTAAAGTAAAATTCTAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-551, gnl|bosTau2|chr22 (127013-126463)
               

               
               1-551, gnl|Hg17|chr3 (28399497-28400055)
               

               
               1-551, gnl|Mm7|chr14 (113688099-113688622)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-551, gnl|bosTau2|chr22 (127013-126463)
               

               
               1-551, gnl|Hg17|chr3 (28399497-28400055)
               

               
               1-551, gnl|Mm7|chr14 (113688099-113688622)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               nmm (0.132802)

	1-551, gnl\|bosTau2\|chr22 (127013-126463)
	1-551, gnl\|Hg17\|chr3 (28399497-28400055)
	1-551, gnl\|Mm7\|chr14 (113688099-113688622)