Non-Coding RNA Search

Ss1.1-Pig2-10J13.5

Sequence:


               
               GAAGGAATTGCCCATCAGAGGCAGTCAGTTTTAACCTGTTTCAGAAATAACTCAAAAGTT
ACTTTAAGCCTTCTAAATCAAAGTATGAAATGTTGGAAAAGCTTTTTATAACTTTGGTAG
CCCCAAATGATAGACACTCTTAAACAGGTGGAAGGGAAGGGAGAAAGGCTGTTGTCTTTA
TTTCTGTCAGCCTATTTGCTTTTAACTCAAATGATAGGGCGAGGCCTAACATTTTGCTAG
TTACTTACCGTTGAAGGAATATCTGTAATGTATTAGAGCAAGTTCCTCAACACCCACTTT
GAGCTGTCATATATTACTATAGCTGTGCTAATTTATACCAGGTAAATTAAGGAAAAAAAG
AATAGTGATGAGAAACTCCTCAAATTTTAGTAACAACAATAGGGAAAAATTGTTCCCTCA
AATATTTAAATTAAAAAAAAAAGTCATCATTGGATTTAGGGAAAGCAAAATGTAACCATT
TCTTAAATGGAATCAACCCATGACTGGATTCCACATAAACACCAAGCCTACAGAGGCATC
ATTTTGCAGTGGGTAAGTGTGTGGACTTGGGTCAAATGCCTACAGCTGAATTCCAAGCTG
CCTCTTGCCAACAGGGAGATTTTAGGCAAATAATTCAGCCTTTCTGTGTCTCAGTACTCT
CTGCTGGGAAATGGAGAGAATAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGGAATTGCCCATCAGAGGCAGTCAGTTTTAACCTGTTTCAGAAATAACTCAAAAGTT
ACTTTAAGCCTTCTAAATCAAAGTATGAAATGTTGGAAAAGCTTTTTATAACTTTGGTAG
CCCCAAATGATAGACACTCTTAAACAGGTGGAAGGGAAGGGAGAAAGGCTGTTGTCTTTA
TTTCTGTCAGCCTATTTGCTTTTAACTCAAATGATAGGGCGAGGCCTAACATTTTGCTAG
TTACTTACCGTTGAAGGAATATCTGTAATGTATTAGAGCAAGTTCCTCAACACCCACTTT
GAGCTGTCATATATTACTATAGCTGTGCTAATTTATACCAGGTAAATTAAGGAAAAAAAG
AATAGTGATGAGAAACTCCTCAAATTTTAGTAACAACAATAGGGAAAAATTGTTCCCTCA
AATATTTAAATTAAAAAAAAAAGTCATCATTGGATTTAGGGAAAGCAAAATGTAACCATT
TCTTAAATGGAATCAACCCATGACTGGATTCCACATAAACACCAAGCCTACAGAGGCATC
ATTTTGCAGTGGGTAAGTGTGTGGACTTGGGTCAAATGCCTACAGCTGAATTCCAAGCTG
CCTCTTGCCAACAGGGAGATTTTAGGCAAATAATTCAGCCTTTCTGTGTCTCAGTACTCT
CTGCTGGGAAATGGAGAGAATAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               152-317, gnl|bosTau2|chr11 (56791830-56791668)
               


               
               321-683, gnl|bosTau2|chr6 (2824475-2824840)
               

               
               321-683, gnl|Hg17|chr4 (120318440-120318817)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               152-317, gnl|bosTau2|chr11 (56791830-56791668)
               


               
               321-683, gnl|bosTau2|chr6 (2824475-2824840)
               

               
               321-683, gnl|Hg17|chr4 (120318440-120318817)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lin (0.145603)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)

	152-317, gnl\|bosTau2\|chr11 (56791830-56791668)

	321-683, gnl\|bosTau2\|chr6 (2824475-2824840)
	321-683, gnl\|Hg17\|chr4 (120318440-120318817)