Non-Coding RNA Search

Ss1.1-Pig2-110F22.5

Sequence:


               
               ACGAAATCAAGCAGTGGTTAGGGAAATTTCTCCTGAAGAGTGGAATATTTCAACTGCCAA
CAAAAGCTGGCCTCGGAGCTGAATAAACAGTATCAGATAGTGGGAAAGAGTAATAGCTGT
GAAGACAAGCAAATCTACATTGGGTCAGACAGATTTTCCAGCTCACAGTCGGAAGCCGGC
ACCATCAAATGAACCTGAGTATCTATGCAAATGGATGGGACTGCCCTATTCAGAGTGCAG
CTGGNGAAGATGAAGCCTTGATTGGAAAGAAATTCCAGAGCTGCATTGACAGCTTCCATA
GTCGGAATAATTCAAAAACCATCCCAACAAGAGAATGCAAGGCTCTGAAGCAGAGACCAC
GATTTGTGGCTTTAAAGAACAGCCAGCATATTTAGGAGGAGAGAATCTGGAGCTCCGAGA
TTATCAGCTAGAAGGTCTCAACTGGCTTGCTCACTCCTGGTGCAAAAGTAACAGTGTAAT
CCTTGCTGATGAAATGGGCCTAGGAAAGACCATCCAGACCATATCATTCCTCTCCTACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACGAAATCAAGCAGTGGTTAGGGAAATTTCTCCTGAAGAGTGGAATATTTCAACTGCCAA
CAAAAGCTGGCCTCGGAGCTGAATAAACAGTATCAGATAGTGGGAAAGAGTAATAGCTGT
GAAGACAAGCAAATCTACATTGGGTCAGACAGATTTTCCAGCTCACAGTCGGAAGCCGGC
ACCATCAAATGAACCTGAGTATCTATGCAAATGGATGGGACTGCCCTATTCAGAGTGCAG
CTGGNGAAGATGAAGCCTTGATTGGAAAGAAATTCCAGAGCTGCATTGACAGCTTCCATA
GTCGGAATAATTCAAAAACCATCCCAACAAGAGAATGCAAGGCTCTGAAGCAGAGACCAC
GATTTGTGGCTTTAAAGAACAGCCAGCATATTTAGGAGGAGAGAATCTGGAGCTCCGAGA
TTATCAGCTAGAAGGTCTCAACTGGCTTGCTCACTCCTGGTGCAAAAGTAACAGTGTAAT
CCTTGCTGATGAAATGGGCCTAGGAAAGACCATCCAGACCATATCATTCCTCTCCTACCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               160-342, gnl|bosTau2|chr21 (8061158-8061339)
               

               
               160-342, gnl|Hg17|chr15 (91290270-91290451)
               

               
               160-342, gnl|Mm7|chr7 (69352529-69352348)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               160-342, gnl|bosTau2|chr21 (8061158-8061339)
               

               
               160-342, gnl|Hg17|chr15 (91290270-91290451)
               

               
               160-342, gnl|Mm7|chr7 (69352529-69352348)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	160-342, gnl\|bosTau2\|chr21 (8061158-8061339)
	160-342, gnl\|Hg17\|chr15 (91290270-91290451)
	160-342, gnl\|Mm7\|chr7 (69352529-69352348)