Ss1.1-Pig2-110K24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATCTCCTGGATGGAGTTGGATTAAAACAGAAGATGGCTGGAAAAGATGTGAATCCTGGA GTCAGGAGCTTGAGAGACAGAGTAACCCGTGTAACGTCAGTCACAGCATTATCATAAATA GTGAAGATGAAGAAATATACAATAATGAAGAGCATGAATATGCATCCAAAAAAAGAAAAA AGGACCACTTTAGAAATGACACAAATACTCAAAGTTTTTATCGTGAAAAATGGATCTATG TCCATAAAGAAAGCACAAAAGAAAGACACGGGTATTGTACTTTAGGAGAAGCTTTTAATC GCTTGGACTTCTCAAGCGCAATTCAGGACATCCGACGGTTCAATTACGTGGTCAGACTTC TGCAACTGATTGCAAAGTCCCAGCTGACGTCACTGAGCGGTGTGGCCCAGAAGAACTACT TCAACATTCTGGATAAAATTGTTCAAAAGGTTCTCGATGACCACCAAAACCCTCGCCTAA TCAAAGATCTTCTCCAAGACCTGAGCTCTACCCTCTGCATTCTCATCAGAGGAGTGGGAA AGTCTGTCCTGGTGGGAAATATCAACATTTGGATTTGCCGACTAGAAACCATTCTCAACT GGCAGCAGCAGCTTCAGAATCTCCAGATGACCAAGCAGGTGGACGGTGGCCTGACGCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATCTCCTGGATGGAGTTGGATTAAAACAGAAGATGGCTGGAAAAGATGTGAATCCTGGA GTCAGGAGCTTGAGAGACAGAGTAACCCGTGTAACGTCAGTCACAGCATTATCATAAATA GTGAAGATGAAGAAATATACAATAATGAAGAGCATGAATATGCATCCAAAAAAAGAAAAA AGGACCACTTTAGAAATGACACAAATACTCAAAGTTTTTATCGTGAAAAATGGATCTATG TCCATAAAGAAAGCACAAAAGAAAGACACGGGTATTGTACTTTAGGAGAAGCTTTTAATC GCTTGGACTTCTCAAGCGCAATTCAGGACATCCGACGGTTCAATTACGTGGTCAGACTTC TGCAACTGATTGCAAAGTCCCAGCTGACGTCACTGAGCGGTGTGGCCCAGAAGAACTACT TCAACATTCTGGATAAAATTGTTCAAAAGGTTCTCGATGACCACCAAAACCCTCGCCTAA TCAAAGATCTTCTCCAAGACCTGAGCTCTACCCTCTGCATTCTCATCAGAGGAGTGGGAA AGTCTGTCCTGGTGGGAAATATCAACATTTGGATTTGCCGACTAGAAACCATTCTCAACT GGCAGCAGCAGCTTCAGAATCTCCAGATGACCAAGCAGGTGGACGGTGGCCTGACGCTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 107-211, gnl|bosTau2|chr1 (100126594-100126490) | |
| 107-211, gnl|canFam2|chr25 (40451064-40451356) | |
| 107-211, gnl|canFam2|chr25 (40451435-40451044) | |
| 107-211, gnl|canFam2|chr25 (40451044-40451434) | |
| 107-211, gnl|danRer3|chr23 (48432302-48432531) | |
| 107-211, gnl|danRer3|chr23 (48432631-48432270) | |
| 107-211, gnl|danRer3|chr23 (48432270-48432631) | |
| 107-211, gnl|dasNov1|scaffold_32606 (45347-45650) | |
| 107-211, gnl|dasNov1|scaffold_32606 (45699-45327) | |
| 107-211, gnl|dasNov1|scaffold_32606 (45327-45699) | |
| 107-211, gnl|echTel1|scaffold_161096 (726-441) | |
| 107-211, gnl|echTel1|scaffold_161096 (369-746) | |
| 107-211, gnl|echTel1|scaffold_161096 (746-369) | |
| 107-211, gnl|hg17|chr1 (785213-785531) | |
| 107-211, gnl|hg17|chr2 (242772426-242772743) | |
| 107-211, gnl|hg17|chr8 (371245-371465) | |
| 107-211, gnl|Hg17|chr8 (371338-371442) | |
| 107-211, gnl|loxAfr1|scaffold_13067 (16983-17277) | |
| 107-211, gnl|loxAfr1|scaffold_13067 (17348-16965) | |
| 107-211, gnl|loxAfr1|scaffold_13067 (16965-17347) | |
| 107-211, gnl|mm7|chr8 (13895045-13895298) | |
| 107-211, gnl|mm7|chr8 (13895370-13895027) | |
| 107-211, gnl|mm7|chr8 (13895027-13895370) | |
| 107-211, gnl|Mm7|chr8 (13895165-13895266) | |
| 107-211, gnl|monDom2|scaffold_1 (110458268-110458043) | |
| 107-211, gnl|monDom2|scaffold_1 (110458014-110458319) | |
| 107-211, gnl|monDom2|scaffold_1 (110459222-110458926) | |
| 107-211, gnl|oryCun1|scaffold_164228 (1457-1170) | |
| 107-211, gnl|oryCun1|scaffold_164228 (1099-1477) | |
| 107-211, gnl|oryCun1|scaffold_164228 (1477-1099) | |
| 107-211, gnl|panTro1|chr1 (795698-796016) | |
| 107-211, gnl|panTro1|chr7 (376926-377146) | |
| 107-211, gnl|panTro1|chr7 (376906-377224) | |
| 107-211, gnl|rheMac2|chr8 (315373-315593) | |
| 107-211, gnl|rheMac2|chr8 (315667-315353) | |
| 107-211, gnl|rheMac2|chr8 (315353-315667) | |
| 450-633, gnl|bosTau2|chr14 (7673271-7673454) | |
| 450-633, gnl|Hg17|chr8 (124594804-124594621) | |
| 450-633, gnl|Mm7|chr15 (58256806-58256623) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 107-211, gnl|bosTau2|chr1 (100126594-100126490) | |
| 107-211, gnl|canFam2|chr25 (40451064-40451356) | |
| 107-211, gnl|canFam2|chr25 (40451435-40451044) | |
| 107-211, gnl|canFam2|chr25 (40451044-40451434) | |
| 107-211, gnl|danRer3|chr23 (48432302-48432531) | |
| 107-211, gnl|danRer3|chr23 (48432631-48432270) | |
| 107-211, gnl|danRer3|chr23 (48432270-48432631) | |
| 107-211, gnl|dasNov1|scaffold_32606 (45347-45650) | |
| 107-211, gnl|dasNov1|scaffold_32606 (45699-45327) | |
| 107-211, gnl|dasNov1|scaffold_32606 (45327-45699) | |
| 107-211, gnl|echTel1|scaffold_161096 (726-441) | |
| 107-211, gnl|echTel1|scaffold_161096 (369-746) | |
| 107-211, gnl|echTel1|scaffold_161096 (746-369) | |
| 107-211, gnl|hg17|chr1 (785213-785531) | |
| 107-211, gnl|hg17|chr2 (242772426-242772743) | |
| 107-211, gnl|hg17|chr8 (371245-371465) | |
| 107-211, gnl|Hg17|chr8 (371338-371442) | |
| 107-211, gnl|loxAfr1|scaffold_13067 (16983-17277) | |
| 107-211, gnl|loxAfr1|scaffold_13067 (17348-16965) | |
| 107-211, gnl|loxAfr1|scaffold_13067 (16965-17347) | |
| 107-211, gnl|mm7|chr8 (13895045-13895298) | |
| 107-211, gnl|mm7|chr8 (13895370-13895027) | |
| 107-211, gnl|mm7|chr8 (13895027-13895370) | |
| 107-211, gnl|Mm7|chr8 (13895165-13895266) | |
| 107-211, gnl|monDom2|scaffold_1 (110458268-110458043) | |
| 107-211, gnl|monDom2|scaffold_1 (110458014-110458319) | |
| 107-211, gnl|monDom2|scaffold_1 (110459222-110458926) | |
| 107-211, gnl|oryCun1|scaffold_164228 (1457-1170) | |
| 107-211, gnl|oryCun1|scaffold_164228 (1099-1477) | |
| 107-211, gnl|oryCun1|scaffold_164228 (1477-1099) | |
| 107-211, gnl|panTro1|chr1 (795698-796016) | |
| 107-211, gnl|panTro1|chr7 (376926-377146) | |
| 107-211, gnl|panTro1|chr7 (376906-377224) | |
| 107-211, gnl|rheMac2|chr8 (315373-315593) | |
| 107-211, gnl|rheMac2|chr8 (315667-315353) | |
| 107-211, gnl|rheMac2|chr8 (315353-315667) | |
| 450-633, gnl|bosTau2|chr14 (7673271-7673454) | |
| 450-633, gnl|Hg17|chr8 (124594804-124594621) | |
| 450-633, gnl|Mm7|chr15 (58256806-58256623) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spl (0.143184) | |
| cty (0.10408) |