Non-Coding RNA Search

Ss1.1-Pig2-110P16.5

Sequence:


               
               TGTTTTTTTAAGTAGAAATACTAAAGAATACCATCTAACTATTCATACCAGTATCCAGTT
GTAGCATAAGGTGTCAAAAACAAATAGGCAAAACATTTGCTGTTTTAACAAGCTATTTCC
TTTTAACAAGAATTCTTGTATTTCTCCCTGTGTTTGAGATGAACATTTTTAAATTTCAAA
GTTGTACAGTTTTTGTTTTCCATTATTTTATCGTTTGTAACTCTATGAAATATATATATA
TTTTTTGCCATTTAACTGTTGTATGTTACTCTGTGTCTGTATCATATAGAAAAAAAATTG
TTTTTGTTTTTGGTTCTCTATGTGATACCAATTAACAATTTAACACTAGCTTTACCTGTC
AAATTCTGCTAGGTCTTTTCTGAAAACTTTGTTTTTAAAAATGCTAATTGCTTGGTAATA
GTGCAATTTCTGTCCCTTTCCCTCTCCCCCAACTTTAAGATCATTTCCTTGTAATTTTTT
ACCCCTCCCCCCCTTTTTTTGGTTTGGGGTTTGTTGTTTTTTGTTTTTGGTTTTGGTTTT
TTTTTTTTGAGCTACTATGCCATCCTCCCTCTGTGAGGCAGTGAGTGTCAGTATTGTTAT
TGCCATGCCTCGACCTGTGGGTGTGTGTAGCAACAGCTAGGCGGCTGGGTAGATTAAGCA
TGCTTCCACCCACCAGTATTCCTCAGAAGGGTTATGTGAGTGTTTCAACCTGGAGTGGGT
TGCATGCTTAATGCCGTCCTCAACAACTAAACCACCCACATACATGTTCATTCAAAAAGG
AAAAAAATAATAATTCTCAGCATTAACCCAGAAGTAGCAAAGCAGTCAGTGATGGTGAAG
CTTAGAGGTCAGACACTGAGCTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTTTTTTAAGTAGAAATACTAAAGAATACCATCTAACTATTCATACCAGTATCCAGTT
GTAGCATAAGGTGTCAAAAACAAATAGGCAAAACATTTGCTGTTTTAACAAGCTATTTCC
TTTTAACAAGAATTCTTGTATTTCTCCCTGTGTTTGAGATGAACATTTTTAAATTTCAAA
GTTGTACAGTTTTTGTTTTCCATTATTTTATCGTTTGTAACTCTATGAAATATATATATA
TTTTTTGCCATTTAACTGTTGTATGTTACTCTGTGTCTGTATCATATAGAAAAAAAATTG
TTTTTGTTTTTGGTTCTCTATGTGATACCAATTAACAATTTAACACTAGCTTTACCTGTC
AAATTCTGCTAGGTCTTTTCTGAAAACTTTGTTTTTAAAAATGCTAATTGCTTGGTAATA
GTGCAATTTCTGTCCCTTTCCCTCTCCCCCAACTTTAAGATCATTTCCTTGTAATTTTTT
ACCCCTCCCCCCCTTTTTTTGGTTTGGGGTTTGTTGTTTTTTGTTTTTGGTTTTGGTTTT
TTTTTTTTGAGCTACTATGCCATCCTCCCTCTGTGAGGCAGTGAGTGTCAGTATTGTTAT
TGCCATGCCTCGACCTGTGGGTGTGTGTAGCAACAGCTAGGCGGCTGGGTAGATTAAGCA
TGCTTCCACCCACCAGTATTCCTCAGAAGGGTTATGTGAGTGTTTCAACCTGGAGTGGGT
TGCATGCTTAATGCCGTCCTCAACAACTAAACCACCCACATACATGTTCATTCAAAAAGG
AAAAAAATAATAATTCTCAGCATTAACCCAGAAGTAGCAAAGCAGTCAGTGATGGTGAAG
CTTAGAGGTCAGACACTGAGCTAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-864, gnl|bosTau2|chr18 (33594009-33594851)
               

               
               4-864, gnl|Hg17|chr16 (71376193-71375334)
               

               
               4-864, gnl|Mm7|chr8 (107559740-107560581)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-864, gnl|bosTau2|chr18 (33594009-33594851)
               

               
               4-864, gnl|Hg17|chr16 (71376193-71375334)
               

               
               4-864, gnl|Mm7|chr8 (107559740-107560581)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	4-864, gnl\|bosTau2\|chr18 (33594009-33594851)
	4-864, gnl\|Hg17\|chr16 (71376193-71375334)
	4-864, gnl\|Mm7\|chr8 (107559740-107560581)