Non-Coding RNA Search

Ss1.1-Pig2-111A19.5

Sequence:


               
               ATGGAATGAATCATGGGTTGAAAAAATGGAAGAAGGGAACTCGAGATGTTGGTATGCAGC
TTTGCTATCAGCTACAGCCCTGAATTATCTGCTGTCTTTAGTTGCTGTCGTCCTATTTTT
TGTTTACTATACTCATCCAGCCAGTTGTGCAGAAAATAAAGCCTTCATCAGTGTCAATAT
GCTCCTCTGCTTTGGTGCTTCTATAATGTCTATACTGCCAAAAATCCAAGAATCACAACC
AAGATCTGGTTTGCTACAGTCTTCAGTAATTACAGTCTACACAATGTATTTGACATGGTC
TGCTATGACCAATGAACCAGAAACAGACTGCAACCCAAGTCTACTGAGCATAATTGGATA
TAATACAACAAGCACTATCCCAAAGAAGGGAGAGTCTGTACAGTGGTGGCATGCTCAAGG
AATTATTGGATTAATCCTCTTTTTATTATGTGTGTTTTATTCAAGCATCCGTACTTCAAA
CAATAGTCAAGTTAATAAACTGACTCTAACAAGTGACGAATCAACATTAATAGAAGATGG
TGGAGCCAGAAGTGATGGATCACTCGAGGATGGAGATGATGTTCACCGAGCCATCGATAA
TGAAAGGGATGGTGTCACTTACAGTTACTCCTTCTTTCACTTTATGCTTTTCCTGGGCTT
CACTTTATATCATGATGACCCTTACCAACTGGTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGAATGAATCATGGGTTGAAAAAATGGAAGAAGGGAACTCGAGATGTTGGTATGCAGC
TTTGCTATCAGCTACAGCCCTGAATTATCTGCTGTCTTTAGTTGCTGTCGTCCTATTTTT
TGTTTACTATACTCATCCAGCCAGTTGTGCAGAAAATAAAGCCTTCATCAGTGTCAATAT
GCTCCTCTGCTTTGGTGCTTCTATAATGTCTATACTGCCAAAAATCCAAGAATCACAACC
AAGATCTGGTTTGCTACAGTCTTCAGTAATTACAGTCTACACAATGTATTTGACATGGTC
TGCTATGACCAATGAACCAGAAACAGACTGCAACCCAAGTCTACTGAGCATAATTGGATA
TAATACAACAAGCACTATCCCAAAGAAGGGAGAGTCTGTACAGTGGTGGCATGCTCAAGG
AATTATTGGATTAATCCTCTTTTTATTATGTGTGTTTTATTCAAGCATCCGTACTTCAAA
CAATAGTCAAGTTAATAAACTGACTCTAACAAGTGACGAATCAACATTAATAGAAGATGG
TGGAGCCAGAAGTGATGGATCACTCGAGGATGGAGATGATGTTCACCGAGCCATCGATAA
TGAAAGGGATGGTGTCACTTACAGTTACTCCTTCTTTCACTTTATGCTTTTCCTGGGCTT
CACTTTATATCATGATGACCCTTACCAACTGGTACA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|57031849|ref|XP_533483.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57031849|ref|XP_533483.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-696, gnl|bosTau2|chr9 (11072001-11072704)
               

               
               1-696, gnl|Hg17|chr6 (122816672-122809619)
               

               
               1-696, gnl|Mm7|chr10 (57341875-57337220)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-696, gnl|bosTau2|chr9 (11072001-11072704)
               

               
               1-696, gnl|Hg17|chr6 (122816672-122809619)
               

               
               1-696, gnl|Mm7|chr10 (57341875-57337220)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sme (0.305437)
               

               
               eep (0.122564)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               eep (0.122564)
               

               
               eje (0.0988338)

	1-696, gnl\|bosTau2\|chr9 (11072001-11072704)
	1-696, gnl\|Hg17\|chr6 (122816672-122809619)
	1-696, gnl\|Mm7\|chr10 (57341875-57337220)