Non-Coding RNA Search

Ss1.1-Pig2-112A19.5

Sequence:


               
               TCCATATCCATCGATTTTTAATCTTCTGCTGAAGGCGACATTAATTATTAAGTATGTACT
TATGCAGCCTACAGAGCACCCGTACTGTTTTCAGCCAACCCTTCTCTCCTGTCAAACCTA
GGAAGACCTTCATTTCCCATTAACCTAATGTGATGGTGAAGTTTTTATTCTCTCAGGCAG
CCCATATGTGTAAATCCAACTAAGGAACGTACTCCATTCAGTAAAACAAACACACGAAAA
GCATCTGTTGCTCAGAGTCATATAAACAAAGCACCAGTTACATGGCATCTGAAGAGATGC
GGGGTGAAGTGGCGCCAGGCTCAGGCTGCCTGCTGGTCTTAGTAGCAGGAGGGCTGTTCT
CGATTGATGCAGCTCTGCCGAAATTTTGATTCCACAATCAGTTTAAAAATAAGATTTTTC
CTCACATTCCTCTTATTTTTCTTTTCTCTAAATTTAATTCGTTTTCTAAGCCAGAAATTA
TACCATTTTGGTTTCTTACAGAAATATAAATGGTTAAGGCATCACATATATTTCAATATA
GGCGTTTGTTCTAGAATTTGTCAAAATATAACTAGTTACTGTGGTGTGTGCCAATTAAGA
CCCAGAGTTGTGTTTCGTCCATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCATATCCATCGATTTTTAATCTTCTGCTGAAGGCGACATTAATTATTAAGTATGTACT
TATGCAGCCTACAGAGCACCCGTACTGTTTTCAGCCAACCCTTCTCTCCTGTCAAACCTA
GGAAGACCTTCATTTCCCATTAACCTAATGTGATGGTGAAGTTTTTATTCTCTCAGGCAG
CCCATATGTGTAAATCCAACTAAGGAACGTACTCCATTCAGTAAAACAAACACACGAAAA
GCATCTGTTGCTCAGAGTCATATAAACAAAGCACCAGTTACATGGCATCTGAAGAGATGC
GGGGTGAAGTGGCGCCAGGCTCAGGCTGCCTGCTGGTCTTAGTAGCAGGAGGGCTGTTCT
CGATTGATGCAGCTCTGCCGAAATTTTGATTCCACAATCAGTTTAAAAATAAGATTTTTC
CTCACATTCCTCTTATTTTTCTTTTCTCTAAATTTAATTCGTTTTCTAAGCCAGAAATTA
TACCATTTTGGTTTCTTACAGAAATATAAATGGTTAAGGCATCACATATATTTCAATATA
GGCGTTTGTTCTAGAATTTGTCAAAATATAACTAGTTACTGTGGTGTGTGCCAATTAAGA
CCCAGAGTTGTGTTTCGTCCATCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-624, gnl|bosTau2|chr18 (15840308-15839694)
               

               
               1-624, gnl|Hg17|chr16 (45674653-45674052)
               

               
               1-624, gnl|Mm7|chr8 (84231267-84230691)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-624, gnl|bosTau2|chr18 (15840308-15839694)
               

               
               1-624, gnl|Hg17|chr16 (45674653-45674052)
               

               
               1-624, gnl|Mm7|chr8 (84231267-84230691)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.292569)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.292569)
               

               
               ebs (0.118301)

	1-624, gnl\|bosTau2\|chr18 (15840308-15839694)
	1-624, gnl\|Hg17\|chr16 (45674653-45674052)
	1-624, gnl\|Mm7\|chr8 (84231267-84230691)