Ss1.1-Pig2-113B01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGATGGTGATATTGACCCTGAGTGGATTGAATCTCTGAATTCTGTTCTGGATGATAATC GACTGCTCACTATGCCCAGTGGAGAAAGGATTCAGTTTGGCCCAAATGTGAACTTTGTAT TTGAAACTCATGATTTAAGTTGTGCCTCACCAGCCACAATATCTAGAATGGGAATGATCT TTCTTAGTGATGAAGAGACAGATCTTAATTCTCTGATAAAATCTTGGTTGAGGAATCAAC CACCTGAATATAGGAATAATCTTGAAAACTGGATTGGGGATTATTTTGAAAAGGCTTTGC AATGGGTTCTAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGA ATGGTTTGTCACATCTACATGGATGCAGAGATCATGATCAATTTGTTATTAATCTCATAA GGGGGCTCAGTGGAAATCTGAACATGAAGTCACGTCTGGAATTCACCAAAGAGGTTTTTA ATTGGGCACGAGAATCTCCTCCAGACCCTCACAGACCAATGGACACCTACTATGACTCGA GTAGAGGAAGATTAGCACCTTATGTGCTGAAAAAGCCAGAAAATTTGACGGCTGATGATT TCAGTAATGGCCAAACTCTTCCAGTCATTCAGACTCCTGACATGCAACGAGGTCTAGATT ATTTCAAACCATGGCTAAGTTCTGATACTAAACAGCCATTTATTCTTGTAGGACCAGAAG GCTGTGGCAAAGGGATGCTGCTCAGGTATGCCTTTTCCCAACTCCGGTCCACTCAAATTG CTACAGTTCACTGTAGCACACAAACTACTTCTCGACATCTCCTGCAGAAATTGAGCCAGA CATGCATGGTAATCAGTACTAATACTGGTCGAGTGTATAGACCAAAAGACTGTGAAAGAC TTGTTCTGTACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGATGGTGATATTGACCCTGAGTGGATTGAATCTCTGAATTCTGTTCTGGATGATAATC GACTGCTCACTATGCCCAGTGGAGAAAGGATTCAGTTTGGCCCAAATGTGAACTTTGTAT TTGAAACTCATGATTTAAGTTGTGCCTCACCAGCCACAATATCTAGAATGGGAATGATCT TTCTTAGTGATGAAGAGACAGATCTTAATTCTCTGATAAAATCTTGGTTGAGGAATCAAC CACCTGAATATAGGAATAATCTTGAAAACTGGATTGGGGATTATTTTGAAAAGGCTTTGC AATGGGTTCTAAAGCAGAATGACTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATGA ATGGTTTGTCACATCTACATGGATGCAGAGATCATGATCAATTTGTTATTAATCTCATAA GGGGGCTCAGTGGAAATCTGAACATGAAGTCACGTCTGGAATTCACCAAAGAGGTTTTTA ATTGGGCACGAGAATCTCCTCCAGACCCTCACAGACCAATGGACACCTACTATGACTCGA GTAGAGGAAGATTAGCACCTTATGTGCTGAAAAAGCCAGAAAATTTGACGGCTGATGATT TCAGTAATGGCCAAACTCTTCCAGTCATTCAGACTCCTGACATGCAACGAGGTCTAGATT ATTTCAAACCATGGCTAAGTTCTGATACTAAACAGCCATTTATTCTTGTAGGACCAGAAG GCTGTGGCAAAGGGATGCTGCTCAGGTATGCCTTTTCCCAACTCCGGTCCACTCAAATTG CTACAGTTCACTGTAGCACACAAACTACTTCTCGACATCTCCTGCAGAAATTGAGCCAGA CATGCATGGTAATCAGTACTAATACTGGTCGAGTGTATAGACCAAAAGACTGTGAAAGAC TTGTTCTGTACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-187, gnl|bosTau2|chr23 (15231840-15231654) | |
| 1-187, gnl|canFam2|chr5 (31671996-31671786) | |
| 1-187, gnl|danRer3|chr19 (37321412-37321621) | |
| 1-187, gnl|dasNov1|scaffold_26305 (48423-48235) | |
| 1-187, gnl|echTel1|scaffold_296312 (40538-40342) | |
| 1-187, gnl|fr1|chrUn (270568203-270567993) | |
| 1-187, gnl|galGal2|chr1 (174245381-174245171) | |
| 1-187, gnl|hg17|chr11 (102554963-102555173) | |
| 1-187, gnl|Hg17|chr11 (102554986-102555172) | |
| 1-187, gnl|loxAfr1|scaffold_20614 (17372-17162) | |
| 1-187, gnl|mm7|chr9 (7118733-7118523) | |
| 1-187, gnl|Mm7|chr9 (7118708-7118522) | |
| 1-187, gnl|monDom2|scaffold_65 (8541179-8541389) | |
| 1-187, gnl|oryCun1|scaffold_200754 (200032-200232) | |
| 1-187, gnl|panTro1|chr9 (104535490-104535700) | |
| 1-187, gnl|rheMac2|chr14 (101782773-101782983) | |
| 1-187, gnl|rn3|chr8 (4010068-4009858) | |
| 1-187, gnl|tetNig1|chrUn_random (47941657-47941447) | |
| 1-187, gnl|xenTro1|scaffold_601 (791540-791750) | |
| 472-734, gnl|bosTau2|chr23 (15213237-15212975) | |
| 472-734, gnl|Hg17|chr11 (102562179-102562441) | |
| 472-734, gnl|Mm7|chr9 (7113570-7113308) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-187, gnl|bosTau2|chr23 (15231840-15231654) | |
| 1-187, gnl|canFam2|chr5 (31671996-31671786) | |
| 1-187, gnl|danRer3|chr19 (37321412-37321621) | |
| 1-187, gnl|dasNov1|scaffold_26305 (48423-48235) | |
| 1-187, gnl|echTel1|scaffold_296312 (40538-40342) | |
| 1-187, gnl|fr1|chrUn (270568203-270567993) | |
| 1-187, gnl|galGal2|chr1 (174245381-174245171) | |
| 1-187, gnl|hg17|chr11 (102554963-102555173) | |
| 1-187, gnl|Hg17|chr11 (102554986-102555172) | |
| 1-187, gnl|loxAfr1|scaffold_20614 (17372-17162) | |
| 1-187, gnl|mm7|chr9 (7118733-7118523) | |
| 1-187, gnl|Mm7|chr9 (7118708-7118522) | |
| 1-187, gnl|monDom2|scaffold_65 (8541179-8541389) | |
| 1-187, gnl|oryCun1|scaffold_200754 (200032-200232) | |
| 1-187, gnl|panTro1|chr9 (104535490-104535700) | |
| 1-187, gnl|rheMac2|chr14 (101782773-101782983) | |
| 1-187, gnl|rn3|chr8 (4010068-4009858) | |
| 1-187, gnl|tetNig1|chrUn_random (47941657-47941447) | |
| 1-187, gnl|xenTro1|scaffold_601 (791540-791750) | |
| 472-734, gnl|bosTau2|chr23 (15213237-15212975) | |
| 472-734, gnl|Hg17|chr11 (102562179-102562441) | |
| 472-734, gnl|Mm7|chr9 (7113570-7113308) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| bla (0.124347) |