Ss1.1-Pig2-113L09.5
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GGCAGAGAAGGGGGAGACCAGTGTGTGACCCTGATTTGGGTACAGCGTGGAGACCCCTTG
TGTGCTAAAACTAGGGAGCGTGTGACTCAGAGCAGGCAGCCTCAGCGTGATGATAGGATG
CAGTCTTCCTGTGGATGTCCTCCCTTGGAAACTTCAGGGAAATCATTCTTCCCAAGCTCT
TGATTTGTTTTTCAACATCTCATGTGTTTTCCTCCAAATCTGATCAAGGGAGTGTGGTGC
CGGCAGAAGGACAGTTTACTTGGTAGAATGGTTCTCGCTCTGCTGGTCTGGCCTCTTCCT
AGAAATCTAGCCTCCTCCAGGAGACCCTGAGGTTGAGAGGAGATGGGATTACTCTGGGGG
CCACCTGACACATCACCAGTCCACACTGCTCCTGGTTTACCCCTAGCAATAGCCAGCAAG
TGTTCAAAAGTGCCCCCTATCTGTTTTTTCCAGATATGGCTTGCACAGTGTGTAGAAACC
AAAACTTTTGAGAAAGATGAGGGAAGCCTTTCTCCCTTCTCCACAGCCCCCGCCCCTTTT
CTCTTATACCTTTCAATGCCAGAGTTCAGTGTTTAAACAGACAAAATATAAGTATTGAAT
AGGTGGCTCATTTACCAAATCCATTTGGTAGGAATAAGCCACCAGCTTTACGATGTGCCT
GATGGATTTTAAACATTCTCCAGGCACCTACTCAAGAGTGCTTTTTTATCACCTTCTAGA
AATACCCAAAGTCTGAGGGGCCCTGGAGTATCTCAGTGCAGGGAGAGAGGACTTCAGTGA
GATGAGTAGTAGGTAGGAAGACGAATAACTTGGACCCTTTAACCGAGTAGAGCGAGCCCA
AGAGAGCTCCACCAGCAAAGGCACCATAGGAACCTGCCAGCAAAGCCAGGTTGGCCTTGT
GCCCTTTAATTTTGAAACTTGCAGGCCCCCACTCACCTCCTGCCAGGAGCTGGGGCAGAA
GAGCCAATTTGGGACTGCTGGCCCAGCCCTGACAGAGAGCTCCCTTCCCACCACCCTCTG
CAGGCTCCCACACCCCTCCTGCCACCTTTATGGATTAGGACCGGGTCCCAACCACAGTCA
GAAAATGACACCATGTACAGTGGCACATCTTGACCAGTCACTAATTTTCACTGTTGTGAA
AGTGATTTGAGTAGAATTAAACAAGTGGTTTTACATCAGTCACTAATT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGCAGAGAAGGGGGAGACCAGTGTGTGACCCTGATTTGGGTACAGCGTGGAGACCCCTTG
TGTGCTAAAACTAGGGAGCGTGTGACTCAGAGCAGGCAGCCTCAGCGTGATGATAGGATG
CAGTCTTCCTGTGGATGTCCTCCCTTGGAAACTTCAGGGAAATCATTCTTCCCAAGCTCT
TGATTTGTTTTTCAACATCTCATGTGTTTTCCTCCAAATCTGATCAAGGGAGTGTGGTGC
CGGCAGAAGGACAGTTTACTTGGTAGAATGGTTCTCGCTCTGCTGGTCTGGCCTCTTCCT
AGAAATCTAGCCTCCTCCAGGAGACCCTGAGGTTGAGAGGAGATGGGATTACTCTGGGGG
CCACCTGACACATCACCAGTCCACACTGCTCCTGGTTTACCCCTAGCAATAGCCAGCAAG
TGTTCAAAAGTGCCCCCTATCTGTTTTTTCCAGATATGGCTTGCACAGTGTGTAGAAACC
AAAACTTTTGAGAAAGATGAGGGAAGCCTTTCTCCCTTCTCCACAGCCCCCGCCCCTTTT
CTCTTATACCTTTCAATGCCAGAGTTCAGTGTTTAAACAGACAAAATATAAGTATTGAAT
AGGTGGCTCATTTACCAAATCCATTTGGTAGGAATAAGCCACCAGCTTTACGATGTGCCT
GATGGATTTTAAACATTCTCCAGGCACCTACTCAAGAGTGCTTTTTTATCACCTTCTAGA
AATACCCAAAGTCTGAGGGGCCCTGGAGTATCTCAGTGCAGGGAGAGAGGACTTCAGTGA
GATGAGTAGTAGGTAGGAAGACGAATAACTTGGACCCTTTAACCGAGTAGAGCGAGCCCA
AGAGAGCTCCACCAGCAAAGGCACCATAGGAACCTGCCAGCAAAGCCAGGTTGGCCTTGT
GCCCTTTAATTTTGAAACTTGCAGGCCCCCACTCACCTCCTGCCAGGAGCTGGGGCAGAA
GAGCCAATTTGGGACTGCTGGCCCAGCCCTGACAGAGAGCTCCCTTCCCACCACCCTCTG
CAGGCTCCCACACCCCTCCTGCCACCTTTATGGATTAGGACCGGGTCCCAACCACAGTCA
GAAAATGACACCATGTACAGTGGCACATCTTGACCAGTCACTAATTTTCACTGTTGTGAA
AGTGATTTGAGTAGAATTAAACAAGTGGTTTTACATCAGTCACTAATT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
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89-759, gnl|bosTau2|chr17 (44199373-44198739) |
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89-759, gnl|canFam2|chr26 (27208138-27207222) |
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89-759, gnl|dasNov1|scaffold_1084 (70198-69318) |
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89-759, gnl|Hg17|chr22 (29926320-29927009) |
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89-759, gnl|hg17|chr4 (123354341-123355256) |
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89-759, gnl|loxAfr1|scaffold_5495 (4334-3463) |
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89-759, gnl|mm7|chr11 (3368124-3368913) |
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89-759, gnl|Mm7|chr11 (3369029-3368433) |
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89-759, gnl|monDom2|scaffold_141 (89891-89100) |
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89-759, gnl|oryCun1|scaffold_178036 (21590-22454) |
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89-759, gnl|panTro1|chr3 (140189891-140190810) |
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89-759, gnl|rheMac2|chr10 (75088651-75087740) |
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89-759, gnl|rn3|chr14 (84063018-84063777) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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89-759, gnl|bosTau2|chr17 (44199373-44198739) |
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89-759, gnl|canFam2|chr26 (27208138-27207222) |
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89-759, gnl|dasNov1|scaffold_1084 (70198-69318) |
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89-759, gnl|Hg17|chr22 (29926320-29927009) |
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89-759, gnl|hg17|chr4 (123354341-123355256) |
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89-759, gnl|loxAfr1|scaffold_5495 (4334-3463) |
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89-759, gnl|mm7|chr11 (3368124-3368913) |
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89-759, gnl|Mm7|chr11 (3369029-3368433) |
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89-759, gnl|monDom2|scaffold_141 (89891-89100) |
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89-759, gnl|oryCun1|scaffold_178036 (21590-22454) |
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89-759, gnl|panTro1|chr3 (140189891-140190810) |
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89-759, gnl|rheMac2|chr10 (75088651-75087740) |
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89-759, gnl|rn3|chr14 (84063018-84063777) |
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fbs (0.175346) |
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nje (0.16592) |
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ski (0.146735) |
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pty (0.142714) |
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ese (0.126502) |
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cly (0.120642) |
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eru (0.120048) |
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fbs (0.175346) |
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nje (0.16592) |
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ski (0.146735) |
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pty (0.142714) |
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ese (0.126502) |
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cly (0.120642) |
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eru (0.120048) |