Non-Coding RNA Search

Ss1.1-Pig2-113O23.5

Sequence:


               
               TGGTGATGGAGGGGGTGTGGCAGGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGTGG
CCGACTGGTGGGGCGCCCGGGAGAACTGCGGCTGCATCTACCGGCTCCGGGTTCGCCTCC
TGGATGTGTACGAAAACGAAGTGGTCAAGTTCTCGGCTTCACCCAATCCGGTTCTTCAGT
GGACTGAGAGAGGCTGTAGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAAGGCATCC
GCTACGTGTCCTTTGAGCAGTATGGGAGGGACACGCGCTCCTGGGTGGGGCACTACGGCG
CCCTCGTGACCCACTCCAGCGTGAGGGTCAGGATCCGCCTGTCCTAACTAACCAGCCCTT
GCCAGCCTTCTGGGGCCGACTGCCACCTGCCAGACACCGTCACCCATCAAGGGCAGCTTT
GCAGCCAGGAGCCAGAGGATGCCGGGGGACAGTGCGAACCCCACTTACTGCTGCTTTGGC
ATGGTGACCCACATGCTGTTGGAGAAACCAGGGATCAAACCAGGTGGTCACTGCTTCCCT
AGCTTTGGGGGGTGGGGGCAGGGGTAGGTGTCAAAGATGACTCGGAGATCTGTACTTTAT
TTGTAAATTTTTTCTCACATGTGTGTGGATATCCGTTGATAGACTGAGTCAAAAAGCAAA
GGTCGTCGGAGCTCCTGCCGTGGTGCAGCAGGATCTGCGTTTTCTCTAGAGCCAGGTCAC
AGGTTGGATCCCCAGCCCAGCACAGGGGATTAGGGATCTGGCATTGCCACACAGCTGTGG
CTTAGGTCCCAACTGCAGCTCGGATCTGATCCCTGGAACAGGAACTCCACATGCTGTGTG
GTGACCAAAAAAGAAAAAGTAAAGACTGAACCAGGATATTCAGTAGGGTACGAAGACTCC
TGCCAGCATGTTCTGGGGGTAAGGCGATTGCTGGCAGGGAGCAGAGGTCAGTCGGGCAGT
CTGTCCTGAGGGAACCAACAGGGCCATCAGAGGGACCCTCCTTGTACTGAGGCATCTCTG
GGACTCACAGCAGGGACCAGGCAACCTCCTCCCCTTTGAGCCAGACTGGTGCTACTGCTT
TTCCTTTTTCTTTTTTTGGCTGTGCCCTCGGCATGTGGAAGTTCCCGGGCCAGGGTCTGA
ATCCGAGCCGCAGCTGCAACCTATGTTGTGGCAACACCAGATCTTTTAACCCACTGCATC
AGCCACATGCAGGTGCAGGGTATCAAACGTGCAGCTCCACAGCAACCCGAGCCACTGCAG
TTGGATTCTTAGCCCACTGCACCAAAGCAGGAATTCCTCTTTTCCTTCTTTTTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTGATGGAGGGGGTGTGGCAGGAGCTGCTGGACAGCGCCCAGATTGAGATCTGTGTGG
CCGACTGGTGGGGCGCCCGGGAGAACTGCGGCTGCATCTACCGGCTCCGGGTTCGCCTCC
TGGATGTGTACGAAAACGAAGTGGTCAAGTTCTCGGCTTCACCCAATCCGGTTCTTCAGT
GGACTGAGAGAGGCTGTAGACAGGTCTCCCACGTCTTCACCAACTTTGGCAAAGGCATCC
GCTACGTGTCCTTTGAGCAGTATGGGAGGGACACGCGCTCCTGGGTGGGGCACTACGGCG
CCCTCGTGACCCACTCCAGCGTGAGGGTCAGGATCCGCCTGTCCTAACTAACCAGCCCTT
GCCAGCCTTCTGGGGCCGACTGCCACCTGCCAGACACCGTCACCCATCAAGGGCAGCTTT
GCAGCCAGGAGCCAGAGGATGCCGGGGGACAGTGCGAACCCCACTTACTGCTGCTTTGGC
ATGGTGACCCACATGCTGTTGGAGAAACCAGGGATCAAACCAGGTGGTCACTGCTTCCCT
AGCTTTGGGGGGTGGGGGCAGGGGTAGGTGTCAAAGATGACTCGGAGATCTGTACTTTAT
TTGTAAATTTTTTCTCACATGTGTGTGGATATCCGTTGATAGACTGAGTCAAAAAGCAAA
GGTCGTCGGAGCTCCTGCCGTGGTGCAGCAGGATCTGCGTTTTCTCTAGAGCCAGGTCAC
AGGTTGGATCCCCAGCCCAGCACAGGGGATTAGGGATCTGGCATTGCCACACAGCTGTGG
CTTAGGTCCCAACTGCAGCTCGGATCTGATCCCTGGAACAGGAACTCCACATGCTGTGTG
GTGACCAAAAAAGAAAAAGTAAAGACTGAACCAGGATATTCAGTAGGGTACGAAGACTCC
TGCCAGCATGTTCTGGGGGTAAGGCGATTGCTGGCAGGGAGCAGAGGTCAGTCGGGCAGT
CTGTCCTGAGGGAACCAACAGGGCCATCAGAGGGACCCTCCTTGTACTGAGGCATCTCTG
GGACTCACAGCAGGGACCAGGCAACCTCCTCCCCTTTGAGCCAGACTGGTGCTACTGCTT
TTCCTTTTTCTTTTTTTGGCTGTGCCCTCGGCATGTGGAAGTTCCCGGGCCAGGGTCTGA
ATCCGAGCCGCAGCTGCAACCTATGTTGTGGCAACACCAGATCTTTTAACCCACTGCATC
AGCCACATGCAGGTGCAGGGTATCAAACGTGCAGCTCCACAGCAACCCGAGCCACTGCAG
TTGGATTCTTAGCCCACTGCACCAAAGCAGGAATTCCTCTTTTCCTTCTTTTTTTTTTTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61843933|ref|XP_588098.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61843933|ref|XP_588098.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               201-449, gnl|bosTau2|chr18 (42116011-42115762)
               

               
               201-449, gnl|Hg17|chr19 (44125234-44125015)
               

               
               201-449, gnl|Mm7|chr7 (25671610-25671857)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               201-449, gnl|bosTau2|chr18 (42116011-42115762)
               

               
               201-449, gnl|Hg17|chr19 (44125234-44125015)
               

               
               201-449, gnl|Mm7|chr7 (25671610-25671857)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	201-449, gnl\|bosTau2\|chr18 (42116011-42115762)
	201-449, gnl\|Hg17\|chr19 (44125234-44125015)
	201-449, gnl\|Mm7\|chr7 (25671610-25671857)