Non-Coding RNA Search

Ss1.1-Pig2-114B23.5

Sequence:


               
               ACTTCCACCACTTTGTGGAGCAGTGCCTTCAGCGCAGCCCGGATGTAAGACCGAGTGCCA
GCACCCTCCTGAACCACTCTTTCTTCAAGCAGATCAAGCGACGTGCCTCAGAGGCTCTGC
CTGAGCTACTTCGTCCTGTCACCCCAATCACCAATTTTGAGGGCAGCCAGTCTCAAGATC
CCAGTGGAATCTTTGGCCTGGTAACAAACCTGGAAGAGCTGGAGGTGGACGACTGGGAGT
TCTGAGCCTCCGAAGAAGGTGCGCGTCCTCATCCCAGGCCGTGAACCTCCAGGGACCCTT
CCCAAGGGCTGGCCACATCCCCACACGCCTGGGTGCAGCCTGGGGAAAGGATATTTCTGC
CAGGAGAGTTGGCTGCTTACTGACTGGGAAGGAAACTCCTGGAGAGAAACTTGGCATTAC
TGTTCCAAGGCTTTTGAGACACAAGGGAGCCCCAACAACCAGGGCTCGGGAGGGGCCGGA
AAGCTGACGTTCCCAGGCCTGTGAGCTCAGGTGACCTGACTTGTTCAGAAGGAAGAGATG
CTGCTCCGGCCCTGGGGGCTGAAGTCCAAGCCCAGGACTTAAGACACCCACCCAGAGCTG
TAAGACTTCTTCCCACTCTAGCTCTCCTACCAGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCCACCACTTTGTGGAGCAGTGCCTTCAGCGCAGCCCGGATGTAAGACCGAGTGCCA
GCACCCTCCTGAACCACTCTTTCTTCAAGCAGATCAAGCGACGTGCCTCAGAGGCTCTGC
CTGAGCTACTTCGTCCTGTCACCCCAATCACCAATTTTGAGGGCAGCCAGTCTCAAGATC
CCAGTGGAATCTTTGGCCTGGTAACAAACCTGGAAGAGCTGGAGGTGGACGACTGGGAGT
TCTGAGCCTCCGAAGAAGGTGCGCGTCCTCATCCCAGGCCGTGAACCTCCAGGGACCCTT
CCCAAGGGCTGGCCACATCCCCACACGCCTGGGTGCAGCCTGGGGAAAGGATATTTCTGC
CAGGAGAGTTGGCTGCTTACTGACTGGGAAGGAAACTCCTGGAGAGAAACTTGGCATTAC
TGTTCCAAGGCTTTTGAGACACAAGGGAGCCCCAACAACCAGGGCTCGGGAGGGGCCGGA
AAGCTGACGTTCCCAGGCCTGTGAGCTCAGGTGACCTGACTTGTTCAGAAGGAAGAGATG
CTGCTCCGGCCCTGGGGGCTGAAGTCCAAGCCCAGGACTTAAGACACCCACCCAGAGCTG
TAAGACTTCTTCCCACTCTAGCTCTCCTACCAGCCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-636, gnl|bosTau2|chr13 (34335102-34335743)
               

               
               3-636, gnl|Hg17|chr17 (59135479-59134312)
               

               
               3-636, gnl|Mm7|chr11 (106273807-106272714)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-636, gnl|bosTau2|chr13 (34335102-34335743)
               

               
               3-636, gnl|Hg17|chr17 (59135479-59134312)
               

               
               3-636, gnl|Mm7|chr11 (106273807-106272714)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nca (0.136874)
               

               
               cly (0.120642)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)
               

               
               cly (0.120642)
               

               
               ecc (0.115035)

	3-636, gnl\|bosTau2\|chr13 (34335102-34335743)
	3-636, gnl\|Hg17\|chr17 (59135479-59134312)
	3-636, gnl\|Mm7\|chr11 (106273807-106272714)