Non-Coding RNA Search

Ss1.1-Pig2-114D22.5

Sequence:


               
               CACTGTGCTTAGAAGTAGTACTAAACTTTCTTTTGAGTCAAAGATTGTCACTTTTTATTG
TGAGGCTTTTTTAAGAACACCTGTGGGGCACCGGCCACTTGCTGCAATCTTGCCTTTTGG
CACACACCCACCAGGACTTCGACCTCTTCTATAACACTTCGGCAATGACATTTAGAACTT
TTAGATACCTGTTAAAGGTGTGGACCAATCCTACTTTCTCTACTCTTTGCTTTGTGCAAC
TCACCATTAACAAAGCCTTGATGATGTACATTGTTCAGACTTCCAGTTGAAGTACATTCC
TTCTAGATTCCTAGCCAGCGGCTCTTACATAGAACGCAGTGTGAGAAGGTGGTGTACAGG
CACAGATGTGAGTGTGTCAATGGGGTGCTCCTCCTTCTCTTTAGTACATTTGCTTTTGGG
GTAGAAAGGGATTTCCATTCGACAGAGACAGAAATCTACAGAAAGGATGAAAGCGAAAGT
CCTTATGGGAGGGAAGGAAGTACTTTGCCAGCTGAGCTCGAGGTGTGAGTGAAAAGTCTG
GTGTCTGATGTGAGGTTGACCATTTCCTTGATATTTTTACTGTGAGTCTTTGAAGTATTA
TGGTTGATTTTTAGAACACATGTTTTATGCCACATAAAATCTTCACACAGTATCACCTTA
CACAACTGTATTAAGCTTTGCAAACTCATACTGAAGAATCATGAGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACTGTGCTTAGAAGTAGTACTAAACTTTCTTTTGAGTCAAAGATTGTCACTTTTTATTG
TGAGGCTTTTTTAAGAACACCTGTGGGGCACCGGCCACTTGCTGCAATCTTGCCTTTTGG
CACACACCCACCAGGACTTCGACCTCTTCTATAACACTTCGGCAATGACATTTAGAACTT
TTAGATACCTGTTAAAGGTGTGGACCAATCCTACTTTCTCTACTCTTTGCTTTGTGCAAC
TCACCATTAACAAAGCCTTGATGATGTACATTGTTCAGACTTCCAGTTGAAGTACATTCC
TTCTAGATTCCTAGCCAGCGGCTCTTACATAGAACGCAGTGTGAGAAGGTGGTGTACAGG
CACAGATGTGAGTGTGTCAATGGGGTGCTCCTCCTTCTCTTTAGTACATTTGCTTTTGGG
GTAGAAAGGGATTTCCATTCGACAGAGACAGAAATCTACAGAAAGGATGAAAGCGAAAGT
CCTTATGGGAGGGAAGGAAGTACTTTGCCAGCTGAGCTCGAGGTGTGAGTGAAAAGTCTG
GTGTCTGATGTGAGGTTGACCATTTCCTTGATATTTTTACTGTGAGTCTTTGAAGTATTA
TGGTTGATTTTTAGAACACATGTTTTATGCCACATAAAATCTTCACACAGTATCACCTTA
CACAACTGTATTAAGCTTTGCAAACTCATACTGAAGAATCATGAGCCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               180-708, gnl|bosTau2|chr28 (563790-564332)
               

               
               180-708, gnl|Hg17|chr1 (225766741-225766195)
               

               
               180-708, gnl|Mm7|chr8 (122428623-122428092)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               180-708, gnl|bosTau2|chr28 (563790-564332)
               

               
               180-708, gnl|Hg17|chr1 (225766741-225766195)
               

               
               180-708, gnl|Mm7|chr8 (122428623-122428092)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mgm (0.180343)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgm (0.180343)

	180-708, gnl\|bosTau2\|chr28 (563790-564332)
	180-708, gnl\|Hg17\|chr1 (225766741-225766195)
	180-708, gnl\|Mm7\|chr8 (122428623-122428092)